Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 TMEM261P1-201ENST00000604899 340 ntBASIC17.37■□□□□ 0.37
PHOX2BQ99453 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PHOX2BQ99453 AC009118.2-201ENST00000613275 655 ntBASIC17.37■□□□□ 0.37
PHOX2BQ99453 MIR6805-201ENST00000615055 62 ntBASIC17.37■□□□□ 0.37
PHOX2BQ99453 AL033527.4-201ENST00000641026 673 ntBASIC17.37■□□□□ 0.37
PHOX2BQ99453 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PHOX2BQ99453 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.37■□□□□ 0.37
PHOX2BQ99453 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHOX2BQ99453 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 AC122714.2-201ENST00000502787 707 ntBASIC17.36■□□□□ 0.37
PHOX2BQ99453 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 FAM8A2P-201ENST00000528813 1142 ntBASIC17.36■□□□□ 0.37
PHOX2BQ99453 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHOX2BQ99453 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 REXO1L6P-201ENST00000603433 1515 ntBASIC17.36■□□□□ 0.37
PHOX2BQ99453 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
PHOX2BQ99453 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 FAM86MP-201ENST00000340703 885 ntBASIC17.35■□□□□ 0.37
PHOX2BQ99453 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.35■□□□□ 0.37
PHOX2BQ99453 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 AC243562.1-201ENST00000560672 389 ntBASIC17.35■□□□□ 0.37
PHOX2BQ99453 AC026150.2-201ENST00000564693 1156 ntBASIC17.35■□□□□ 0.37
PHOX2BQ99453 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.35■□□□□ 0.37
PHOX2BQ99453 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.35■□□□□ 0.37
PHOX2BQ99453 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHOX2BQ99453 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 HCG4-201ENST00000418983 998 ntBASIC17.34■□□□□ 0.37
PHOX2BQ99453 AC112492.5-201ENST00000421897 457 ntBASIC17.34■□□□□ 0.37
PHOX2BQ99453 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 MTMR9LP-203ENST00000426597 1545 ntBASIC17.34■□□□□ 0.37
PHOX2BQ99453 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PHOX2BQ99453 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 AC138969.3-201ENST00000546612 1459 ntBASIC17.34■□□□□ 0.37
PHOX2BQ99453 AC138932.2-201ENST00000548268 1459 ntBASIC17.34■□□□□ 0.37
PHOX2BQ99453 AC126755.4-201ENST00000549796 1459 ntBASIC17.34■□□□□ 0.37
PHOX2BQ99453 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 GGTLC5P-201ENST00000617623 998 ntBASIC17.34■□□□□ 0.37
PHOX2BQ99453 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
PHOX2BQ99453 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms