Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.32■□□□□ 0.04
SPENQ96T58 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SPENQ96T58 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.32■□□□□ 0.04
SPENQ96T58 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
SPENQ96T58 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.32■□□□□ 0.04
SPENQ96T58 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SPENQ96T58 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SPENQ96T58 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.31■□□□□ 0.04
SPENQ96T58 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 AC009407.1-201ENST00000568958 598 ntBASIC15.31■□□□□ 0.04
SPENQ96T58 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.31■□□□□ 0.04
SPENQ96T58 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SPENQ96T58 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.31■□□□□ 0.04
SPENQ96T58 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SPENQ96T58 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.31■□□□□ 0.04
SPENQ96T58 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.31■□□□□ 0.04
SPENQ96T58 CU639417.3-201ENST00000624240 1404 ntBASIC15.31■□□□□ 0.04
SPENQ96T58 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SPENQ96T58 KRT8P23-201ENST00000560090 1207 ntBASIC15.31■□□□□ 0.04
SPENQ96T58 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.31■□□□□ 0.04
SPENQ96T58 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.31■□□□□ 0.04
SPENQ96T58 AL359881.2-201ENST00000602973 570 ntBASIC15.31■□□□□ 0.04
SPENQ96T58 SPTSSB-204ENST00000617024 1292 ntBASIC15.31■□□□□ 0.04
SPENQ96T58 MIR6080-201ENST00000617359 66 ntBASIC15.31■□□□□ 0.04
SPENQ96T58 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.31■□□□□ 0.04
SPENQ96T58 AC129492.6-201ENST00000611383 1305 ntBASIC15.31■□□□□ 0.04
SPENQ96T58 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.31■□□□□ 0.04
SPENQ96T58 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.31■□□□□ 0.04
SPENQ96T58 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SPENQ96T58 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SPENQ96T58 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SPENQ96T58 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.3■□□□□ 0.04
SPENQ96T58 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.3■□□□□ 0.04
SPENQ96T58 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.3■□□□□ 0.04
SPENQ96T58 AL009183.1-201ENST00000603760 355 ntBASIC15.3■□□□□ 0.04
SPENQ96T58 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.3■□□□□ 0.04
SPENQ96T58 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SPENQ96T58 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SPENQ96T58 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SPENQ96T58 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.29■□□□□ 0.04
SPENQ96T58 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 WASH6P-202ENST00000359512 1437 ntBASIC15.29■□□□□ 0.04
SPENQ96T58 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SPENQ96T58 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.29■□□□□ 0.04
SPENQ96T58 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SPENQ96T58 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms