Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCC1Q96S66 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCC1Q96S66 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCC1Q96S66 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCC1Q96S66 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCC1Q96S66 TSPY26P-202ENST00000565928 3884 ntBASIC14.57□□□□□ -0.08
CLCC1Q96S66 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CLCC1Q96S66 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.57□□□□□ -0.08
CLCC1Q96S66 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.57□□□□□ -0.08
CLCC1Q96S66 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CLCC1Q96S66 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.57□□□□□ -0.08
CLCC1Q96S66 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
CLCC1Q96S66 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 AL441883.1-201ENST00000566170 1045 ntBASIC14.56□□□□□ -0.08
CLCC1Q96S66 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 MIR3180-4-201ENST00000582223 153 ntBASIC14.56□□□□□ -0.08
CLCC1Q96S66 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 AC011558.1-201ENST00000623459 338 ntBASIC14.56□□□□□ -0.08
CLCC1Q96S66 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 PCDHB17P-201ENST00000539533 2393 ntBASIC14.56□□□□□ -0.08
CLCC1Q96S66 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLCC1Q96S66 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.56□□□□□ -0.08
CLCC1Q96S66 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 BX664615.1-201ENST00000443558 458 ntBASIC14.55□□□□□ -0.08
CLCC1Q96S66 AC034232.1-201ENST00000506026 1064 ntBASIC14.55□□□□□ -0.08
CLCC1Q96S66 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 AC022898.2-201ENST00000616822 1312 ntBASIC14.55□□□□□ -0.08
CLCC1Q96S66 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.55□□□□□ -0.08
CLCC1Q96S66 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLCC1Q96S66 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms