Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL21A1Q96P44 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 UBALD1-205ENST00000590891 2641 ntBASIC16.28■□□□□ 0.2
COL21A1Q96P44 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL21A1Q96P44 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 AC116353.5-201ENST00000638148 1699 ntBASIC16.27■□□□□ 0.2
COL21A1Q96P44 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.27■□□□□ 0.2
COL21A1Q96P44 PCDHB19P-201ENST00000570871 2371 ntBASIC16.27■□□□□ 0.2
COL21A1Q96P44 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 MIR5100-201ENST00000579544 119 ntBASIC16.27■□□□□ 0.2
COL21A1Q96P44 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL21A1Q96P44 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COL21A1Q96P44 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL21A1Q96P44 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
COL21A1Q96P44 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.27■□□□□ 0.19
COL21A1Q96P44 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.27■□□□□ 0.19
COL21A1Q96P44 INTS4P1-201ENST00000438455 1935 ntBASIC16.27■□□□□ 0.19
COL21A1Q96P44 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL21A1Q96P44 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.27■□□□□ 0.19
COL21A1Q96P44 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 AL591684.3-201ENST00000605187 298 ntBASIC16.26■□□□□ 0.19
COL21A1Q96P44 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 AC012313.10-201ENST00000623509 926 ntBASIC16.26■□□□□ 0.19
COL21A1Q96P44 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
COL21A1Q96P44 AC060834.1-201ENST00000443027 2032 ntBASIC16.26■□□□□ 0.19
COL21A1Q96P44 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL21A1Q96P44 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 TSPY19P-201ENST00000418461 509 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms