Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 AP000997.3-201ENST00000623333 2250 ntBASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.69■□□□□ 0.42
NECTIN4Q96NY8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 HCG4-201ENST00000418983 998 ntBASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 SPDYE22P-201ENST00000582158 798 ntBASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 AL008721.1-201ENST00000609964 604 ntBASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NECTIN4Q96NY8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AC092580.3-201ENST00000430932 139 ntBASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AC004890.2-204ENST00000481968 304 ntBASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AP000842.3-202ENST00000569238 1080 ntBASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 REXO1L9P-201ENST00000604264 2108 ntBASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AL662799.1-202ENST00000614205 422 ntBASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AC025048.6-201ENST00000634326 1161 ntBASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 AL353732.1-201ENST00000569618 1459 ntBASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.67■□□□□ 0.42
NECTIN4Q96NY8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 MIR346-201ENST00000362234 95 ntBASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 NME2P1-201ENST00000426182 414 ntBASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 SERBP1P5-201ENST00000510079 1181 ntBASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 LINC01451-201ENST00000623792 534 ntBASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NECTIN4Q96NY8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms