Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 AC090616.6-201ENST00000582640 721 ntBASIC15.47■□□□□ 0.07
PTP4A1Q93096 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 AL445228.2-201ENST00000605589 952 ntBASIC15.47■□□□□ 0.07
PTP4A1Q93096 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.47■□□□□ 0.07
PTP4A1Q93096 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
PTP4A1Q93096 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 AL353593.2-201ENST00000602529 1483 ntBASIC15.46■□□□□ 0.07
PTP4A1Q93096 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 BX276092.5-203ENST00000456199 560 ntBASIC15.46■□□□□ 0.07
PTP4A1Q93096 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 AL121672.3-201ENST00000608644 468 ntBASIC15.46■□□□□ 0.07
PTP4A1Q93096 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.46■□□□□ 0.07
PTP4A1Q93096 AC079328.2-201ENST00000561241 3354 ntBASIC15.46■□□□□ 0.07
PTP4A1Q93096 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A1Q93096 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PTP4A1Q93096 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTP4A1Q93096 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTP4A1Q93096 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.46■□□□□ 0.06
PTP4A1Q93096 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
PTP4A1Q93096 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTP4A1Q93096 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTP4A1Q93096 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 FRMD8P1-201ENST00000440433 1524 ntBASIC15.45■□□□□ 0.06
PTP4A1Q93096 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 FAM220CP-201ENST00000395253 831 ntBASIC15.45■□□□□ 0.06
PTP4A1Q93096 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.45■□□□□ 0.06
PTP4A1Q93096 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 AL592071.1-201ENST00000611956 408 ntBASIC15.45■□□□□ 0.06
PTP4A1Q93096 IGHV3-41-201ENST00000613121 348 ntBASIC15.45■□□□□ 0.06
PTP4A1Q93096 AP000550.4-202ENST00000639755 178 ntBASIC15.45■□□□□ 0.06
PTP4A1Q93096 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A1Q93096 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms