Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AL645728.2-201ENST00000641974 660 ntBASIC15.43■□□□□ 0.06
RNF138Q8WVD3 AL139011.1-202ENST00000642063 584 ntBASIC15.43■□□□□ 0.06
RNF138Q8WVD3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.43■□□□□ 0.06
RNF138Q8WVD3 AC020916.1-201ENST00000587762 1774 ntBASIC15.43■□□□□ 0.06
RNF138Q8WVD3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF138Q8WVD3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
RNF138Q8WVD3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
RNF138Q8WVD3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.43■□□□□ 0.06
RNF138Q8WVD3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 AC105020.1-201ENST00000435356 2205 ntBASIC15.42■□□□□ 0.06
RNF138Q8WVD3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 POLD2P1-201ENST00000511220 997 ntBASIC15.42■□□□□ 0.06
RNF138Q8WVD3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 KRT19P2-202ENST00000557173 1012 ntBASIC15.42■□□□□ 0.06
RNF138Q8WVD3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 AC131009.4-201ENST00000624048 1740 ntBASIC15.42■□□□□ 0.06
RNF138Q8WVD3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RNF138Q8WVD3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 SNX33P1-201ENST00000592116 1762 ntBASIC15.41■□□□□ 0.06
RNF138Q8WVD3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 PDPK2P-202ENST00000562415 1191 ntBASIC15.41■□□□□ 0.06
RNF138Q8WVD3 AC040169.1-201ENST00000565382 521 ntBASIC15.41■□□□□ 0.06
RNF138Q8WVD3 AC018845.2-201ENST00000568326 409 ntBASIC15.41■□□□□ 0.06
RNF138Q8WVD3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 AC023141.13-201ENST00000604991 943 ntBASIC15.41■□□□□ 0.06
RNF138Q8WVD3 AC004877.2-201ENST00000623941 599 ntBASIC15.41■□□□□ 0.06
RNF138Q8WVD3 AC007064.4-201ENST00000637740 555 ntBASIC15.41■□□□□ 0.06
RNF138Q8WVD3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF138Q8WVD3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF138Q8WVD3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms