Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP1Q8TDR0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP1Q8TDR0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAF3IP1Q8TDR0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAF3IP1Q8TDR0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP1Q8TDR0 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAF3IP1Q8TDR0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAF3IP1Q8TDR0 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
TRAF3IP1Q8TDR0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 NUS1P2-201ENST00000417358 873 ntBASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 AL135999.2-201ENST00000622438 1686 ntBASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAF3IP1Q8TDR0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 PKD1P5-201ENST00000532415 10291 ntBASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAF3IP1Q8TDR0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAF3IP1Q8TDR0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms