Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC26.61■■□□□ 1.85
VPS8Q8N3P4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 SNX33P1-201ENST00000592116 1762 ntBASIC26.6■■□□□ 1.85
VPS8Q8N3P4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 STOM-202ENST00000347359 870 ntTSL 2 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 SIGLEC29P-201ENST00000599873 1114 ntBASIC26.6■■□□□ 1.85
VPS8Q8N3P4 AL009183.1-201ENST00000603760 355 ntBASIC26.6■■□□□ 1.85
VPS8Q8N3P4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VPS8Q8N3P4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC26.59■■□□□ 1.85
VPS8Q8N3P4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 MIR3687-2-201ENST00000577708 61 ntBASIC26.58■■□□□ 1.85
VPS8Q8N3P4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 MIR3687-1-201ENST00000614492 61 ntBASIC26.58■■□□□ 1.85
VPS8Q8N3P4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VPS8Q8N3P4 PCDHB17P-201ENST00000539533 2393 ntBASIC26.58■■□□□ 1.85
VPS8Q8N3P4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC26.58■■□□□ 1.84
VPS8Q8N3P4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 AC112191.1-201ENST00000523689 701 ntBASIC26.57■■□□□ 1.84
VPS8Q8N3P4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 AL691403.2-201ENST00000618460 490 ntBASIC26.57■■□□□ 1.84
VPS8Q8N3P4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC26.57■■□□□ 1.84
VPS8Q8N3P4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 CD82-202ENST00000342935 967 ntTSL 5 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
VPS8Q8N3P4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms