Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 MIR7706-201ENST00000613747 67 ntBASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 AC116407.3-201ENST00000623905 1129 ntBASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 ELK2BP-201ENST00000415014 1224 ntBASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 AC079776.4-201ENST00000511039 504 ntBASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SCUBE3Q8IX30 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 AC092910.1-201ENST00000482027 1129 ntBASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 AC093909.1-201ENST00000504731 1122 ntBASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 AL356488.2-201ENST00000602755 427 ntBASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 AC060834.1-201ENST00000443027 2032 ntBASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SCUBE3Q8IX30 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.04■□□□□ 0.48
SCUBE3Q8IX30 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms