Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 AC092865.6-201ENST00000642101 219 ntBASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCN4BQ8IWT1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 AL513190.1-201ENST00000621254 727 ntBASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 AC010507.1-201ENST00000633895 436 ntBASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.09■□□□□ 0.49
SCN4BQ8IWT1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 BCAR1-209ENST00000546196 1340 ntBASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCN4BQ8IWT1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 AC004832.2-201ENST00000426397 482 ntBASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 DNAJB3-201ENST00000446806 729 ntBASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 PAWRP1-201ENST00000451083 565 ntBASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 AC087163.2-201ENST00000457299 853 ntBASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 MIR3687-2-201ENST00000577708 61 ntBASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 MIR3687-1-201ENST00000614492 61 ntBASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCN4BQ8IWT1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCN4BQ8IWT1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms