Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 AL645939.2-201ENST00000427340 991 ntBASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 AC068137.2-201ENST00000605408 478 ntBASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 AC009053.2-201ENST00000563701 2365 ntBASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFA11Q86Y39 AC067852.2-201ENST00000590513 2313 ntBASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 AL031432.2-201ENST00000566714 459 ntBASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 AL928711.1-201ENST00000570165 459 ntBASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 AC091812.2-201ENST00000619081 385 ntBASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NDUFA11Q86Y39 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.3□□□□□ -0.28
NDUFA11Q86Y39 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms