Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 AC079328.2-201ENST00000561241 3354 ntBASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 MIR4497-201ENST00000583208 89 ntBASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 AC022188.1-201ENST00000620960 1664 ntBASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
LRRTM1Q86UE6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 KRT18P22-201ENST00000402024 1347 ntBASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 HLA-A-202ENST00000376806 1854 ntBASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 LINC00554-201ENST00000564841 3011 ntBASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 STARP1-201ENST00000397973 869 ntBASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 HYMAI-201ENST00000635591 3347 ntBASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.95□□□□□ -0.02
LRRTM1Q86UE6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AL049757.1-201ENST00000616842 1596 ntBASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AC007950.2-201ENST00000615045 2347 ntBASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.94□□□□□ -0.02
LRRTM1Q86UE6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms