Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC099343.3-201ENST00000605834 2503 ntBASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.37□□□□□ -0.27
KCNIP4Q6PIL6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 LINC02012-201ENST00000608206 1725 ntBASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AL163051.1-201ENST00000569214 1512 ntBASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 POM121L13P-201ENST00000422362 380 ntBASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AC144831.1-201ENST00000573312 2656 ntBASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
KCNIP4Q6PIL6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 AC126335.2-201ENST00000623362 4637 ntBASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.35□□□□□ -0.27
KCNIP4Q6PIL6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
KCNIP4Q6PIL6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms