Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.07■□□□□ 0
C11orf88Q6PI97 AC009102.3-201ENST00000623118 1491 ntBASIC15.07■□□□□ 0
C11orf88Q6PI97 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
C11orf88Q6PI97 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.07■□□□□ 0
C11orf88Q6PI97 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.07■□□□□ 0
C11orf88Q6PI97 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.06■□□□□ 0
C11orf88Q6PI97 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
C11orf88Q6PI97 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
C11orf88Q6PI97 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.06■□□□□ 0
C11orf88Q6PI97 INGX-201ENST00000359239 846 ntBASIC15.06■□□□□ 0
C11orf88Q6PI97 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
C11orf88Q6PI97 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.06■□□□□ 0
C11orf88Q6PI97 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.06■□□□□ 0
C11orf88Q6PI97 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.06■□□□□ 0
C11orf88Q6PI97 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.06■□□□□ 0
C11orf88Q6PI97 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.06■□□□□ 0
C11orf88Q6PI97 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.06■□□□□ 0
C11orf88Q6PI97 AC009065.1-201ENST00000564055 1225 ntBASIC15.06■□□□□ 0
C11orf88Q6PI97 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
C11orf88Q6PI97 WWOX-216ENST00000569818 525 ntBASIC15.06■□□□□ 0
C11orf88Q6PI97 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.06■□□□□ 0
C11orf88Q6PI97 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.06■□□□□ 0
C11orf88Q6PI97 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
C11orf88Q6PI97 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
C11orf88Q6PI97 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
C11orf88Q6PI97 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.06■□□□□ 0
C11orf88Q6PI97 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
C11orf88Q6PI97 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 AC093010.1-201ENST00000473625 1624 ntBASIC15.06■□□□□ 0
C11orf88Q6PI97 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
C11orf88Q6PI97 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
C11orf88Q6PI97 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.05■□□□□ 0
C11orf88Q6PI97 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.05■□□□□ 0
C11orf88Q6PI97 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
C11orf88Q6PI97 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
C11orf88Q6PI97 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
C11orf88Q6PI97 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.05■□□□□ 0
C11orf88Q6PI97 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.05■□□□□ 0
C11orf88Q6PI97 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
C11orf88Q6PI97 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ 0
C11orf88Q6PI97 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
C11orf88Q6PI97 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
C11orf88Q6PI97 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.05■□□□□ -0
C11orf88Q6PI97 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.05■□□□□ -0
C11orf88Q6PI97 MIR149-201ENST00000384879 89 ntBASIC15.05■□□□□ -0
C11orf88Q6PI97 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.05■□□□□ -0
C11orf88Q6PI97 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 NEK4P2-201ENST00000580004 1012 ntBASIC15.05■□□□□ -0
C11orf88Q6PI97 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
C11orf88Q6PI97 AC139887.4-201ENST00000607877 719 ntBASIC15.05■□□□□ -0
C11orf88Q6PI97 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
C11orf88Q6PI97 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.05■□□□□ -0
C11orf88Q6PI97 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.05■□□□□ -0
C11orf88Q6PI97 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.05■□□□□ -0
C11orf88Q6PI97 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms