Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LYSMD4Q5XG99 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 AP000842.3-202ENST00000569238 1080 ntBASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 AC027307.2-201ENST00000591252 911 ntBASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 AC027307.3-201ENST00000594262 1100 ntBASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
LYSMD4Q5XG99 GNAS-203ENST00000306120 1878 ntBASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 AL031055.1-201ENST00000606362 631 ntBASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 AL358472.5-202ENST00000641448 1267 ntBASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LYSMD4Q5XG99 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms