Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
FREM1Q5H8C1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
FREM1Q5H8C1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.05■□□□□ -0
FREM1Q5H8C1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 KRT19P2-202ENST00000557173 1012 ntBASIC15.05■□□□□ -0
FREM1Q5H8C1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.05■□□□□ -0
FREM1Q5H8C1 AP001094.4-201ENST00000579008 2176 ntBASIC15.05■□□□□ -0
FREM1Q5H8C1 LETM1P2-201ENST00000597330 2178 ntBASIC15.05■□□□□ -0
FREM1Q5H8C1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.05■□□□□ -0
FREM1Q5H8C1 AC004877.2-201ENST00000623941 599 ntBASIC15.05■□□□□ -0
FREM1Q5H8C1 AC005593.1-201ENST00000624894 515 ntBASIC15.05■□□□□ -0
FREM1Q5H8C1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
FREM1Q5H8C1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
FREM1Q5H8C1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.04■□□□□ -0
FREM1Q5H8C1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.04■□□□□ -0
FREM1Q5H8C1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 RPSAP43-201ENST00000402237 625 ntBASIC15.04■□□□□ -0
FREM1Q5H8C1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.04■□□□□ -0
FREM1Q5H8C1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.04■□□□□ -0
FREM1Q5H8C1 ADH5P3-201ENST00000433842 1137 ntBASIC15.04■□□□□ -0
FREM1Q5H8C1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.04■□□□□ -0
FREM1Q5H8C1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
FREM1Q5H8C1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.04■□□□□ -0
FREM1Q5H8C1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.04■□□□□ -0
FREM1Q5H8C1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.04■□□□□ -0
FREM1Q5H8C1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 AC092053.1-201ENST00000605787 1936 ntBASIC15.04■□□□□ -0
FREM1Q5H8C1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 KRT18P13-201ENST00000400056 1290 ntBASIC15.04■□□□□ -0
FREM1Q5H8C1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.04■□□□□ -0
FREM1Q5H8C1 IGLL3P-201ENST00000412472 434 ntBASIC15.04■□□□□ -0
FREM1Q5H8C1 BX842568.4-201ENST00000421222 227 ntBASIC15.04■□□□□ -0
FREM1Q5H8C1 SLC25A6P2-201ENST00000497974 877 ntBASIC15.04■□□□□ -0
FREM1Q5H8C1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.04■□□□□ -0
FREM1Q5H8C1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.04■□□□□ -0
FREM1Q5H8C1 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.04■□□□□ -0
FREM1Q5H8C1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.04■□□□□ -0
FREM1Q5H8C1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.03■□□□□ -0
FREM1Q5H8C1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.03■□□□□ -0
FREM1Q5H8C1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
FREM1Q5H8C1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
FREM1Q5H8C1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.03■□□□□ -0
FREM1Q5H8C1 AC107918.2-201ENST00000530817 355 ntBASIC15.03■□□□□ -0
FREM1Q5H8C1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
FREM1Q5H8C1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.03■□□□□ -0
FREM1Q5H8C1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.03■□□□□ -0
FREM1Q5H8C1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.03■□□□□ -0
FREM1Q5H8C1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.03■□□□□ -0
FREM1Q5H8C1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
FREM1Q5H8C1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FREM1Q5H8C1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FREM1Q5H8C1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
FREM1Q5H8C1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
FREM1Q5H8C1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
FREM1Q5H8C1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FREM1Q5H8C1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.02■□□□□ -0
FREM1Q5H8C1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.02■□□□□ -0
FREM1Q5H8C1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.02■□□□□ -0
FREM1Q5H8C1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.02■□□□□ -0
FREM1Q5H8C1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
FREM1Q5H8C1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.02■□□□□ -0
FREM1Q5H8C1 AC040169.1-201ENST00000565382 521 ntBASIC15.02■□□□□ -0
FREM1Q5H8C1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms