Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ALFQ53S48 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.66■□□□□ 0.42
ALFQ53S48 AP002414.1-201ENST00000391405 1147 ntBASIC17.66■□□□□ 0.42
ALFQ53S48 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.66■□□□□ 0.42
ALFQ53S48 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.66■□□□□ 0.42
ALFQ53S48 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.66■□□□□ 0.42
ALFQ53S48 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
ALFQ53S48 AC034105.1-201ENST00000563488 319 ntBASIC17.66■□□□□ 0.42
ALFQ53S48 AC145285.3-201ENST00000564603 959 ntBASIC17.66■□□□□ 0.42
ALFQ53S48 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.66■□□□□ 0.42
ALFQ53S48 TERC-201ENST00000602385 541 ntBASIC17.66■□□□□ 0.42
ALFQ53S48 Z83851.2-201ENST00000609564 659 ntBASIC17.66■□□□□ 0.42
ALFQ53S48 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.66■□□□□ 0.42
ALFQ53S48 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.66■□□□□ 0.42
ALFQ53S48 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.66■□□□□ 0.42
ALFQ53S48 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ALFQ53S48 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.66■□□□□ 0.42
ALFQ53S48 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
ALFQ53S48 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALFQ53S48 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ALFQ53S48 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.65■□□□□ 0.42
ALFQ53S48 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ALFQ53S48 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.65■□□□□ 0.42
ALFQ53S48 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ALFQ53S48 PI4KAP1-204ENST00000612579 1703 ntBASIC17.65■□□□□ 0.42
ALFQ53S48 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 AC108073.2-201ENST00000464002 357 ntBASIC17.65■□□□□ 0.42
ALFQ53S48 AC108751.1-201ENST00000490852 363 ntBASIC17.65■□□□□ 0.42
ALFQ53S48 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.65■□□□□ 0.42
ALFQ53S48 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 AC106730.1-201ENST00000566722 1090 ntBASIC17.65■□□□□ 0.42
ALFQ53S48 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.65■□□□□ 0.42
ALFQ53S48 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.65■□□□□ 0.42
ALFQ53S48 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.65■□□□□ 0.42
ALFQ53S48 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ALFQ53S48 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ALFQ53S48 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.65■□□□□ 0.42
ALFQ53S48 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.65■□□□□ 0.42
ALFQ53S48 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALFQ53S48 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
ALFQ53S48 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.64■□□□□ 0.42
ALFQ53S48 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ALFQ53S48 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ALFQ53S48 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ALFQ53S48 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALFQ53S48 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.64■□□□□ 0.41
ALFQ53S48 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
ALFQ53S48 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ALFQ53S48 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ALFQ53S48 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.64■□□□□ 0.41
ALFQ53S48 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.64■□□□□ 0.41
ALFQ53S48 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ALFQ53S48 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.64■□□□□ 0.41
ALFQ53S48 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ALFQ53S48 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ALFQ53S48 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALFQ53S48 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ALFQ53S48 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ALFQ53S48 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ALFQ53S48 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALFQ53S48 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALFQ53S48 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALFQ53S48 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ALFQ53S48 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms