Protein–RNA interactions for Protein: Q3BBW0

NBPF9, Neuroblastoma breakpoint family member 9, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF9Q3BBW0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 FAM207CP-201ENST00000443486 507 ntBASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 AC005412.3-201ENST00000580309 715 ntBASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 LINC01451-201ENST00000623792 534 ntBASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 AC104581.1-202ENST00000635932 2618 ntBASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NBPF9Q3BBW0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 AC090164.3-201ENST00000610780 2143 ntBASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 AL138781.2-201ENST00000617896 1843 ntBASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 AP005018.1-201ENST00000525475 301 ntBASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 LYSMD4-203ENST00000378904 2122 ntBASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NBPF9Q3BBW0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 GK-202ENST00000378941 458 ntTSL 3 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 SPDYE7P-202ENST00000420373 878 ntBASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 GAPDHP21-201ENST00000450301 1010 ntBASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 AL158211.3-201ENST00000607385 239 ntBASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NBPF9Q3BBW0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NBPF9Q3BBW0 AC092580.3-201ENST00000430932 139 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms