Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 FAM215A-202ENST00000632077 792 ntBASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.98■□□□□ 0.15
PRICKLE4Q2TBC4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 AL031284.1-201ENST00000419297 478 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 PAWRP1-201ENST00000451083 565 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 AC136632.2-201ENST00000512891 861 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 DUX4L17-201ENST00000557360 1267 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 AC105339.3-201ENST00000560043 636 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 SLC25A6P4-201ENST00000586535 553 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 TERC-201ENST00000602385 541 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 AL805961.1-202ENST00000641562 540 ntBASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.97■□□□□ 0.15
PRICKLE4Q2TBC4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 AD000864.1-201ENST00000624076 2295 ntBASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 AC009078.2-202ENST00000463353 338 ntBASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 RNA5SP419-201ENST00000515908 135 ntBASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 AL121894.2-201ENST00000602977 491 ntBASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PRICKLE4Q2TBC4 AP002414.3-201ENST00000589352 1468 ntBASIC15.96■□□□□ 0.14
PRICKLE4Q2TBC4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PRICKLE4Q2TBC4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRICKLE4Q2TBC4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRICKLE4Q2TBC4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.96■□□□□ 0.14
PRICKLE4Q2TBC4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRICKLE4Q2TBC4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRICKLE4Q2TBC4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.95■□□□□ 0.14
PRICKLE4Q2TBC4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRICKLE4Q2TBC4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRICKLE4Q2TBC4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRICKLE4Q2TBC4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms