Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.29■□□□□ 0.2
RAE1P78406 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.29■□□□□ 0.2
RAE1P78406 UBALD1-205ENST00000590891 2641 ntBASIC16.29■□□□□ 0.2
RAE1P78406 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.29■□□□□ 0.2
RAE1P78406 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.29■□□□□ 0.2
RAE1P78406 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 RBM17P3-201ENST00000417687 1192 ntBASIC16.29■□□□□ 0.2
RAE1P78406 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.29■□□□□ 0.2
RAE1P78406 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.29■□□□□ 0.2
RAE1P78406 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.29■□□□□ 0.2
RAE1P78406 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.29■□□□□ 0.2
RAE1P78406 MTDHP3-201ENST00000594186 672 ntBASIC16.29■□□□□ 0.2
RAE1P78406 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
RAE1P78406 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAE1P78406 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
RAE1P78406 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RAE1P78406 AL645728.1-201ENST00000366221 2101 ntBASIC16.28■□□□□ 0.2
RAE1P78406 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.28■□□□□ 0.2
RAE1P78406 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
RAE1P78406 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RAE1P78406 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 AL356309.3-201ENST00000624132 1934 ntBASIC16.28■□□□□ 0.2
RAE1P78406 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.28■□□□□ 0.2
RAE1P78406 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
RAE1P78406 AL121772.3-201ENST00000610840 674 ntBASIC16.28■□□□□ 0.2
RAE1P78406 AL355877.3-201ENST00000622820 899 ntBASIC16.28■□□□□ 0.2
RAE1P78406 AL022326.1-202ENST00000641533 845 ntBASIC16.28■□□□□ 0.2
RAE1P78406 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.28■□□□□ 0.2
RAE1P78406 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.28■□□□□ 0.2
RAE1P78406 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
RAE1P78406 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAE1P78406 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.28■□□□□ 0.2
RAE1P78406 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.28■□□□□ 0.2
RAE1P78406 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAE1P78406 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.27■□□□□ 0.2
RAE1P78406 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RAE1P78406 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAE1P78406 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
RAE1P78406 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.27■□□□□ 0.2
RAE1P78406 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.27■□□□□ 0.2
RAE1P78406 FGFR3P6-201ENST00000457012 610 ntBASIC16.27■□□□□ 0.2
RAE1P78406 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAE1P78406 SART3-203ENST00000546611 1184 ntBASIC16.27■□□□□ 0.2
RAE1P78406 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.27■□□□□ 0.2
RAE1P78406 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.27■□□□□ 0.2
RAE1P78406 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.27■□□□□ 0.2
RAE1P78406 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.27■□□□□ 0.2
RAE1P78406 AL139288.1-201ENST00000623748 933 ntBASIC16.27■□□□□ 0.2
RAE1P78406 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAE1P78406 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.27■□□□□ 0.19
RAE1P78406 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAE1P78406 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAE1P78406 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAE1P78406 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.27■□□□□ 0.19
RAE1P78406 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAE1P78406 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAE1P78406 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAE1P78406 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAE1P78406 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAE1P78406 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAE1P78406 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAE1P78406 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
RAE1P78406 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.26■□□□□ 0.19
RAE1P78406 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAE1P78406 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAE1P78406 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAE1P78406 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAE1P78406 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAE1P78406 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAE1P78406 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAE1P78406 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAE1P78406 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms