Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
TRA2BP62995 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.2■□□□□ 0.18
TRA2BP62995 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.2■□□□□ 0.18
TRA2BP62995 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.2■□□□□ 0.18
TRA2BP62995 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.2■□□□□ 0.18
TRA2BP62995 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 TERC-201ENST00000602385 541 ntBASIC16.2■□□□□ 0.18
TRA2BP62995 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 AC004706.3-202ENST00000621574 984 ntBASIC16.2■□□□□ 0.18
TRA2BP62995 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.2■□□□□ 0.18
TRA2BP62995 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.2■□□□□ 0.18
TRA2BP62995 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRA2BP62995 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.19■□□□□ 0.18
TRA2BP62995 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.19■□□□□ 0.18
TRA2BP62995 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.19■□□□□ 0.18
TRA2BP62995 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRA2BP62995 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 NKILA-202ENST00000614771 2598 ntBASIC16.19■□□□□ 0.18
TRA2BP62995 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.19■□□□□ 0.18
TRA2BP62995 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.19■□□□□ 0.18
TRA2BP62995 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.19■□□□□ 0.18
TRA2BP62995 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.19■□□□□ 0.18
TRA2BP62995 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TRA2BP62995 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.19■□□□□ 0.18
TRA2BP62995 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 AF238378.1-201ENST00000526806 358 ntBASIC16.19■□□□□ 0.18
TRA2BP62995 DUX4L17-201ENST00000557360 1267 ntBASIC16.19■□□□□ 0.18
TRA2BP62995 IFNL4P1-201ENST00000607083 540 ntBASIC16.19■□□□□ 0.18
TRA2BP62995 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.19■□□□□ 0.18
TRA2BP62995 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRA2BP62995 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.19■□□□□ 0.18
TRA2BP62995 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.19■□□□□ 0.18
TRA2BP62995 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
TRA2BP62995 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRA2BP62995 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRA2BP62995 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.18■□□□□ 0.18
TRA2BP62995 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.18■□□□□ 0.18
TRA2BP62995 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.18■□□□□ 0.18
TRA2BP62995 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.18■□□□□ 0.18
TRA2BP62995 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.18■□□□□ 0.18
TRA2BP62995 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TRA2BP62995 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.18■□□□□ 0.18
TRA2BP62995 AC243591.1-201ENST00000452967 1364 ntBASIC16.18■□□□□ 0.18
TRA2BP62995 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRA2BP62995 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.18■□□□□ 0.18
TRA2BP62995 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.18■□□□□ 0.18
TRA2BP62995 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRA2BP62995 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TRA2BP62995 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRA2BP62995 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
TRA2BP62995 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms