Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLDN6P56747 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.47■□□□□ 0.23
CLDN6P56747 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 TUBB3P1-201ENST00000405796 1332 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN6P56747 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN6P56747 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN6P56747 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 TREML5P-201ENST00000421694 576 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 GPS2P2-201ENST00000430745 888 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 CNN2P2-201ENST00000443536 909 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 CNN2P3-201ENST00000450201 906 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLDN6P56747 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 AC069335.1-201ENST00000489972 472 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 AC067863.1-201ENST00000494933 530 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.46■□□□□ 0.23
CLDN6P56747 AC243562.1-201ENST00000560672 389 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 AC051619.7-201ENST00000568314 623 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 AL136317.3-201ENST00000618497 906 ntBASIC16.46■□□□□ 0.23
CLDN6P56747 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CLDN6P56747 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN6P56747 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN6P56747 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN6P56747 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CLDN6P56747 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CLDN6P56747 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 TFAMP1-201ENST00000412727 736 ntBASIC16.45■□□□□ 0.22
CLDN6P56747 BASP1P1-201ENST00000430708 665 ntBASIC16.45■□□□□ 0.22
CLDN6P56747 RBPMS2P1-201ENST00000437762 623 ntBASIC16.45■□□□□ 0.22
CLDN6P56747 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 DUX4L17-201ENST00000557360 1267 ntBASIC16.45■□□□□ 0.22
CLDN6P56747 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 AL390754.1-201ENST00000619088 582 ntBASIC16.45■□□□□ 0.22
CLDN6P56747 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN6P56747 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN6P56747 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CLDN6P56747 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN6P56747 AL390961.4-201ENST00000623958 2535 ntBASIC16.45■□□□□ 0.22
CLDN6P56747 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLDN6P56747 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms