Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
RNF144AP50876 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RNF144AP50876 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RNF144AP50876 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF144AP50876 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 SLC25A1P3-201ENST00000395415 828 ntBASIC16.01■□□□□ 0.15
RNF144AP50876 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF144AP50876 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.01■□□□□ 0.15
RNF144AP50876 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF144AP50876 PRELID1P1-202ENST00000567272 903 ntBASIC16.01■□□□□ 0.15
RNF144AP50876 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF144AP50876 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.01■□□□□ 0.15
RNF144AP50876 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RNF144AP50876 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
RNF144AP50876 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 AL353593.2-201ENST00000602529 1483 ntBASIC16.01■□□□□ 0.15
RNF144AP50876 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.01■□□□□ 0.15
RNF144AP50876 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF144AP50876 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF144AP50876 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
RNF144AP50876 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.01■□□□□ 0.15
RNF144AP50876 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RNF144AP50876 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
RNF144AP50876 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
RNF144AP50876 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RNF144AP50876 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RNF144AP50876 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
RNF144AP50876 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 AL118508.1-201ENST00000613502 2345 ntBASIC16■□□□□ 0.15
RNF144AP50876 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16■□□□□ 0.15
RNF144AP50876 AC103564.2-201ENST00000432853 1299 ntBASIC16■□□□□ 0.15
RNF144AP50876 AC132008.2-207ENST00000454517 770 ntBASIC16■□□□□ 0.15
RNF144AP50876 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16■□□□□ 0.15
RNF144AP50876 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16■□□□□ 0.15
RNF144AP50876 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16■□□□□ 0.15
RNF144AP50876 AP001269.4-201ENST00000609611 512 ntBASIC16■□□□□ 0.15
RNF144AP50876 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 AD001527.2-201ENST00000622994 785 ntBASIC16■□□□□ 0.15
RNF144AP50876 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16■□□□□ 0.15
RNF144AP50876 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF144AP50876 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF144AP50876 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RNF144AP50876 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16■□□□□ 0.15
RNF144AP50876 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RNF144AP50876 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF144AP50876 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 AL135999.2-201ENST00000622438 1686 ntBASIC15.99■□□□□ 0.15
RNF144AP50876 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF144AP50876 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF144AP50876 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.99■□□□□ 0.15
RNF144AP50876 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms