Protein–RNA interactions for Protein: P45378

TNNT3, Troponin T, fast skeletal muscle, humanhuman

Predicted RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3P45378 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.66■□□□□ 0.58
TNNT3P45378 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.66■□□□□ 0.58
TNNT3P45378 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
TNNT3P45378 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TNNT3P45378 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TNNT3P45378 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNT3P45378 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNT3P45378 AL163051.1-201ENST00000569214 1512 ntBASIC18.65■□□□□ 0.58
TNNT3P45378 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TNNT3P45378 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
TNNT3P45378 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.65■□□□□ 0.58
TNNT3P45378 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNT3P45378 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 AL137013.1-201ENST00000432946 1228 ntBASIC18.65■□□□□ 0.58
TNNT3P45378 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNT3P45378 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 AC140113.3-201ENST00000605663 199 ntBASIC18.65■□□□□ 0.58
TNNT3P45378 LINC01023-201ENST00000606054 436 ntBASIC18.65■□□□□ 0.58
TNNT3P45378 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
TNNT3P45378 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.65■□□□□ 0.58
TNNT3P45378 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
TNNT3P45378 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TNNT3P45378 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNNT3P45378 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TNNT3P45378 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNNT3P45378 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNNT3P45378 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.64■□□□□ 0.58
TNNT3P45378 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TNNT3P45378 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.64■□□□□ 0.57
TNNT3P45378 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.64■□□□□ 0.57
TNNT3P45378 AC104390.1-201ENST00000555663 520 ntBASIC18.64■□□□□ 0.57
TNNT3P45378 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.64■□□□□ 0.57
TNNT3P45378 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.64■□□□□ 0.57
TNNT3P45378 AC024243.1-201ENST00000609234 778 ntBASIC18.64■□□□□ 0.57
TNNT3P45378 AL031432.5-201ENST00000641059 760 ntBASIC18.64■□□□□ 0.57
TNNT3P45378 AL161772.1-201ENST00000610494 4412 ntBASIC18.64■□□□□ 0.57
TNNT3P45378 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.64■□□□□ 0.57
TNNT3P45378 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.64■□□□□ 0.57
TNNT3P45378 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TNNT3P45378 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TNNT3P45378 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNNT3P45378 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNNT3P45378 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNNT3P45378 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TNNT3P45378 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TNNT3P45378 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.63■□□□□ 0.57
TNNT3P45378 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.63■□□□□ 0.57
TNNT3P45378 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.63■□□□□ 0.57
TNNT3P45378 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNNT3P45378 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms