Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.62■■□□□ 1.05
COL15A1P39059 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 AC068880.1-201ENST00000507289 2297 ntBASIC21.62■■□□□ 1.05
COL15A1P39059 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.62■■□□□ 1.05
COL15A1P39059 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL15A1P39059 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COL15A1P39059 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.62■■□□□ 1.05
COL15A1P39059 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 AC002472.2-201ENST00000442739 958 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.61■■□□□ 1.05
COL15A1P39059 UGT1A2P-201ENST00000454886 866 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.61■■□□□ 1.05
COL15A1P39059 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.61■■□□□ 1.05
COL15A1P39059 AC087641.1-201ENST00000557561 1021 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 AF228730.6-201ENST00000641497 218 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 AC084121.3-201ENST00000641716 218 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 AC105233.6-201ENST00000642093 218 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.61■■□□□ 1.05
COL15A1P39059 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
COL15A1P39059 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.61■■□□□ 1.05
COL15A1P39059 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.61■■□□□ 1.05
COL15A1P39059 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL15A1P39059 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 AC067852.2-201ENST00000590513 2313 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.61■■□□□ 1.05
COL15A1P39059 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
COL15A1P39059 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.61■■□□□ 1.05
COL15A1P39059 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.61■■□□□ 1.05
COL15A1P39059 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.61■■□□□ 1.05
COL15A1P39059 AC109635.5-201ENST00000533593 962 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.61■■□□□ 1.05
COL15A1P39059 LINC01225-203ENST00000563550 1244 ntBASIC21.61■■□□□ 1.05
COL15A1P39059 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.61■■□□□ 1.05
COL15A1P39059 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.61■■□□□ 1.05
COL15A1P39059 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.61■■□□□ 1.05
COL15A1P39059 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL15A1P39059 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.6■■□□□ 1.05
COL15A1P39059 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
COL15A1P39059 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 FO538757.1-201ENST00000623083 1397 ntBASIC21.6■■□□□ 1.05
COL15A1P39059 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
COL15A1P39059 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.6■■□□□ 1.05
COL15A1P39059 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.6■■□□□ 1.05
COL15A1P39059 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.6■■□□□ 1.05
COL15A1P39059 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COL15A1P39059 AC015922.1-201ENST00000421102 1152 ntBASIC21.6■■□□□ 1.05
COL15A1P39059 TREML5P-201ENST00000421694 576 ntBASIC21.6■■□□□ 1.05
COL15A1P39059 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.6■■□□□ 1.05
COL15A1P39059 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.6■■□□□ 1.05
COL15A1P39059 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.6■■□□□ 1.05
COL15A1P39059 AC026150.2-201ENST00000564693 1156 ntBASIC21.6■■□□□ 1.05
COL15A1P39059 AC140878.1-201ENST00000565277 250 ntBASIC21.6■■□□□ 1.05
COL15A1P39059 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
COL15A1P39059 AC084121.4-201ENST00000641598 221 ntBASIC21.6■■□□□ 1.05
COL15A1P39059 AF228730.8-201ENST00000642140 221 ntBASIC21.6■■□□□ 1.05
COL15A1P39059 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL15A1P39059 AC134043.2-201ENST00000624206 2238 ntBASIC21.59■■□□□ 1.05
COL15A1P39059 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL15A1P39059 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL15A1P39059 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL15A1P39059 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL15A1P39059 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.59■■□□□ 1.05
COL15A1P39059 AC008677.1-201ENST00000519230 1561 ntBASIC21.59■■□□□ 1.05
COL15A1P39059 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.59■■□□□ 1.05
COL15A1P39059 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.59■■□□□ 1.05
COL15A1P39059 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL15A1P39059 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.59■■□□□ 1.05
COL15A1P39059 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.59■■□□□ 1.05
COL15A1P39059 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.59■■□□□ 1.05
COL15A1P39059 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
COL15A1P39059 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms