Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HOXC8P31273 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXC8P31273 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXC8P31273 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 AC107890.1-201ENST00000422478 521 ntBASIC18.57■□□□□ 0.56
HOXC8P31273 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
HOXC8P31273 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.57■□□□□ 0.56
HOXC8P31273 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 AC027307.2-201ENST00000591252 911 ntBASIC18.57■□□□□ 0.56
HOXC8P31273 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.57■□□□□ 0.56
HOXC8P31273 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 UXT-AS1-201ENST00000590504 1525 ntBASIC18.57■□□□□ 0.56
HOXC8P31273 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HOXC8P31273 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HOXC8P31273 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXC8P31273 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXC8P31273 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXC8P31273 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.56■□□□□ 0.56
HOXC8P31273 MIR943-201ENST00000401286 94 ntBASIC18.56■□□□□ 0.56
HOXC8P31273 SPDYE7P-202ENST00000420373 878 ntBASIC18.56■□□□□ 0.56
HOXC8P31273 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.56■□□□□ 0.56
HOXC8P31273 AC125807.1-201ENST00000483097 614 ntBASIC18.56■□□□□ 0.56
HOXC8P31273 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXC8P31273 AC093214.1-201ENST00000511688 1107 ntBASIC18.56■□□□□ 0.56
HOXC8P31273 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXC8P31273 ALG1L8P-201ENST00000533887 760 ntBASIC18.56■□□□□ 0.56
HOXC8P31273 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.56■□□□□ 0.56
HOXC8P31273 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.56■□□□□ 0.56
HOXC8P31273 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.56■□□□□ 0.56
HOXC8P31273 AP001350.2-201ENST00000625104 1094 ntBASIC18.56■□□□□ 0.56
HOXC8P31273 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.56■□□□□ 0.56
HOXC8P31273 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.56■□□□□ 0.56
HOXC8P31273 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HOXC8P31273 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HOXC8P31273 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HOXC8P31273 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXC8P31273 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.55■□□□□ 0.56
HOXC8P31273 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.55■□□□□ 0.56
HOXC8P31273 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HOXC8P31273 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
HOXC8P31273 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.55■□□□□ 0.56
HOXC8P31273 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.55■□□□□ 0.56
HOXC8P31273 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.55■□□□□ 0.56
HOXC8P31273 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 AC138761.1-201ENST00000584393 385 ntBASIC18.55■□□□□ 0.56
HOXC8P31273 CYP2A7P1-201ENST00000595391 815 ntBASIC18.55■□□□□ 0.56
HOXC8P31273 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.55■□□□□ 0.56
HOXC8P31273 AL158211.3-201ENST00000607385 239 ntBASIC18.55■□□□□ 0.56
HOXC8P31273 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXC8P31273 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HOXC8P31273 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
HOXC8P31273 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.55■□□□□ 0.56
HOXC8P31273 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXC8P31273 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.55■□□□□ 0.56
HOXC8P31273 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HOXC8P31273 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HOXC8P31273 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXC8P31273 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.54■□□□□ 0.56
HOXC8P31273 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC8P31273 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC8P31273 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HOXC8P31273 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC8P31273 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.54■□□□□ 0.56
HOXC8P31273 MIR661-201ENST00000384842 89 ntBASIC18.54■□□□□ 0.56
HOXC8P31273 AC142381.1-201ENST00000426099 345 ntBASIC18.54■□□□□ 0.56
HOXC8P31273 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.54■□□□□ 0.56
HOXC8P31273 BASP1P1-201ENST00000430708 665 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms