Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL589182.2-201ENST00000619332 1049 ntBASIC17.37■□□□□ 0.37
HLA-DPA1P20036 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DPA1P20036 AL121761.2-201ENST00000598007 1648 ntBASIC17.36■□□□□ 0.37
HLA-DPA1P20036 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 AC106820.2-201ENST00000563775 3264 ntBASIC17.36■□□□□ 0.37
HLA-DPA1P20036 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 UNC93B7-201ENST00000509439 705 ntBASIC17.36■□□□□ 0.37
HLA-DPA1P20036 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HLA-DPA1P20036 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.35■□□□□ 0.37
HLA-DPA1P20036 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 MTDHP4-201ENST00000600287 670 ntBASIC17.35■□□□□ 0.37
HLA-DPA1P20036 AL353135.1-201ENST00000606729 504 ntBASIC17.35■□□□□ 0.37
HLA-DPA1P20036 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DPA1P20036 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DPA1P20036 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms