Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.53■□□□□ 0.88
NCLP19338 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
NCLP19338 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NCLP19338 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NCLP19338 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.53■□□□□ 0.88
NCLP19338 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 AL596257.1-201ENST00000641463 2694 ntBASIC20.52■□□□□ 0.88
NCLP19338 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.52■□□□□ 0.88
NCLP19338 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.52■□□□□ 0.88
NCLP19338 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.52■□□□□ 0.88
NCLP19338 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.52■□□□□ 0.88
NCLP19338 GCSHP2-201ENST00000560971 527 ntBASIC20.52■□□□□ 0.88
NCLP19338 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.52■□□□□ 0.88
NCLP19338 AL121956.5-201ENST00000625261 221 ntBASIC20.52■□□□□ 0.88
NCLP19338 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NCLP19338 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NCLP19338 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NCLP19338 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCLP19338 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC20.52■□□□□ 0.87
NCLP19338 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.52■□□□□ 0.87
NCLP19338 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCLP19338 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCLP19338 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
NCLP19338 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.52■□□□□ 0.87
NCLP19338 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
NCLP19338 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NCLP19338 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NCLP19338 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NCLP19338 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.51■□□□□ 0.87
NCLP19338 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NCLP19338 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.51■□□□□ 0.87
NCLP19338 AL671277.2-201ENST00000458060 996 ntBASIC20.51■□□□□ 0.87
NCLP19338 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NCLP19338 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.51■□□□□ 0.87
NCLP19338 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.51■□□□□ 0.87
NCLP19338 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NCLP19338 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
NCLP19338 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NCLP19338 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
NCLP19338 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
NCLP19338 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.51■□□□□ 0.87
NCLP19338 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NCLP19338 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.5■□□□□ 0.87
NCLP19338 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
NCLP19338 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
NCLP19338 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.5■□□□□ 0.87
NCLP19338 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NCLP19338 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 STARP1-201ENST00000397973 869 ntBASIC20.5■□□□□ 0.87
NCLP19338 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.5■□□□□ 0.87
NCLP19338 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.5■□□□□ 0.87
NCLP19338 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 FAM86EP-206ENST00000510506 987 ntBASIC20.5■□□□□ 0.87
NCLP19338 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
NCLP19338 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.5■□□□□ 0.87
NCLP19338 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.5■□□□□ 0.87
NCLP19338 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.5■□□□□ 0.87
NCLP19338 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.5■□□□□ 0.87
NCLP19338 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
NCLP19338 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NCLP19338 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.5■□□□□ 0.87
NCLP19338 AC068418.2-201ENST00000577309 3703 ntBASIC20.5■□□□□ 0.87
NCLP19338 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NCLP19338 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms