Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 AL353692.3-201ENST00000407031 1396 ntBASIC16.29■□□□□ 0.2
NCK1P16333 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 MMP23A-201ENST00000234610 1017 ntBASIC16.29■□□□□ 0.2
NCK1P16333 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 IGHGP-201ENST00000390555 1178 ntBASIC16.29■□□□□ 0.2
NCK1P16333 COX5BP2-201ENST00000392354 334 ntBASIC16.29■□□□□ 0.2
NCK1P16333 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.29■□□□□ 0.2
NCK1P16333 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 AC124947.2-201ENST00000547118 1133 ntBASIC16.29■□□□□ 0.2
NCK1P16333 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 AC109462.3-201ENST00000573934 613 ntBASIC16.29■□□□□ 0.2
NCK1P16333 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.29■□□□□ 0.2
NCK1P16333 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.29■□□□□ 0.2
NCK1P16333 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.29■□□□□ 0.2
NCK1P16333 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.29■□□□□ 0.2
NCK1P16333 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCK1P16333 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NCK1P16333 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
NCK1P16333 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NCK1P16333 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NCK1P16333 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.28■□□□□ 0.2
NCK1P16333 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
NCK1P16333 HLA-F-220ENST00000434407 884 ntBASIC16.28■□□□□ 0.2
NCK1P16333 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.28■□□□□ 0.2
NCK1P16333 AC019129.2-201ENST00000609837 1235 ntBASIC16.28■□□□□ 0.2
NCK1P16333 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.28■□□□□ 0.2
NCK1P16333 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.28■□□□□ 0.2
NCK1P16333 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.28■□□□□ 0.2
NCK1P16333 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NCK1P16333 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
NCK1P16333 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.27■□□□□ 0.2
NCK1P16333 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NCK1P16333 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NCK1P16333 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms