Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CD28P10747 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD28P10747 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD28P10747 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.45□□□□□ -0.26
CD28P10747 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CD28P10747 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CD28P10747 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CD28P10747 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD28P10747 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.45□□□□□ -0.26
CD28P10747 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 AP006288.1-201ENST00000446065 395 ntBASIC13.45□□□□□ -0.26
CD28P10747 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.45□□□□□ -0.26
CD28P10747 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.45□□□□□ -0.26
CD28P10747 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.45□□□□□ -0.26
CD28P10747 OR7E47P-204ENST00000575924 449 ntBASIC13.45□□□□□ -0.26
CD28P10747 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CD28P10747 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.45□□□□□ -0.26
CD28P10747 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.45□□□□□ -0.26
CD28P10747 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.45□□□□□ -0.26
CD28P10747 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD28P10747 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CD28P10747 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 LTB4R2-202ENST00000528054 3092 ntBASIC13.44□□□□□ -0.26
CD28P10747 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CD28P10747 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CD28P10747 AC046185.3-201ENST00000623228 1824 ntBASIC13.44□□□□□ -0.26
CD28P10747 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CD28P10747 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.44□□□□□ -0.26
CD28P10747 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.44□□□□□ -0.26
CD28P10747 ACTG1P4-201ENST00000425123 1122 ntBASIC13.44□□□□□ -0.26
CD28P10747 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.44□□□□□ -0.26
CD28P10747 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.44□□□□□ -0.26
CD28P10747 CEND1P1-201ENST00000451006 455 ntBASIC13.44□□□□□ -0.26
CD28P10747 YBX1P5-201ENST00000509441 847 ntBASIC13.44□□□□□ -0.26
CD28P10747 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.44□□□□□ -0.26
CD28P10747 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC13.44□□□□□ -0.26
CD28P10747 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.44□□□□□ -0.26
CD28P10747 KRT19P2-202ENST00000557173 1012 ntBASIC13.44□□□□□ -0.26
CD28P10747 AC096734.2-201ENST00000562054 433 ntBASIC13.44□□□□□ -0.26
CD28P10747 AC027796.2-201ENST00000575326 344 ntBASIC13.44□□□□□ -0.26
CD28P10747 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.44□□□□□ -0.26
CD28P10747 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 FZD10-202ENST00000539839 3282 ntBASIC13.44□□□□□ -0.26
CD28P10747 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD28P10747 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.44□□□□□ -0.26
CD28P10747 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms