Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 AC139713.2-201ENST00000641328 2723 ntBASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 REXO1L11P-201ENST00000620964 1927 ntBASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 AC254562.1-201ENST00000417586 456 ntBASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 PMS2P2-201ENST00000425039 1128 ntBASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 KRT19P2-202ENST00000557173 1012 ntBASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 BCAR1-209ENST00000546196 1340 ntBASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 ALG1L5P-201ENST00000482043 771 ntBASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 AC023141.13-201ENST00000604991 943 ntBASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB40ALP0C0E4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB40ALP0C0E4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms