Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.33■□□□□ 0.36
RETP07949 AC068137.2-201ENST00000605408 478 ntBASIC17.33■□□□□ 0.36
RETP07949 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RETP07949 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RETP07949 AC132938.5-201ENST00000624980 1813 ntBASIC17.33■□□□□ 0.36
RETP07949 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.32■□□□□ 0.36
RETP07949 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.32■□□□□ 0.36
RETP07949 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RETP07949 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RETP07949 AC148477.5-201ENST00000625164 1645 ntBASIC17.32■□□□□ 0.36
RETP07949 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
RETP07949 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 AC003669.1-201ENST00000334569 611 ntBASIC17.32■□□□□ 0.36
RETP07949 KLF4P1-201ENST00000412782 1185 ntBASIC17.32■□□□□ 0.36
RETP07949 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.32■□□□□ 0.36
RETP07949 BASP1P1-201ENST00000430708 665 ntBASIC17.32■□□□□ 0.36
RETP07949 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.32■□□□□ 0.36
RETP07949 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.32■□□□□ 0.36
RETP07949 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.32■□□□□ 0.36
RETP07949 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.32■□□□□ 0.36
RETP07949 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.32■□□□□ 0.36
RETP07949 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.32■□□□□ 0.36
RETP07949 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.32■□□□□ 0.36
RETP07949 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.32■□□□□ 0.36
RETP07949 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RETP07949 HCG11-201ENST00000411553 5696 ntBASIC17.32■□□□□ 0.36
RETP07949 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.32■□□□□ 0.36
RETP07949 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.32■□□□□ 0.36
RETP07949 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.32■□□□□ 0.36
RETP07949 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.32■□□□□ 0.36
RETP07949 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RETP07949 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.31■□□□□ 0.36
RETP07949 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.31■□□□□ 0.36
RETP07949 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RETP07949 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.31■□□□□ 0.36
RETP07949 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 PTCHD3P3-201ENST00000403073 906 ntBASIC17.31■□□□□ 0.36
RETP07949 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RETP07949 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.31■□□□□ 0.36
RETP07949 GAPDHP21-201ENST00000450301 1010 ntBASIC17.31■□□□□ 0.36
RETP07949 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.31■□□□□ 0.36
RETP07949 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.31■□□□□ 0.36
RETP07949 DUX4L27-201ENST00000554796 1261 ntBASIC17.31■□□□□ 0.36
RETP07949 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.31■□□□□ 0.36
RETP07949 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.31■□□□□ 0.36
RETP07949 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.31■□□□□ 0.36
RETP07949 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.31■□□□□ 0.36
RETP07949 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RETP07949 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RETP07949 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RETP07949 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RETP07949 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RETP07949 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.31■□□□□ 0.36
RETP07949 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.3■□□□□ 0.36
RETP07949 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
RETP07949 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.3■□□□□ 0.36
RETP07949 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RETP07949 BCL2-203ENST00000589955 5011 ntBASIC17.3■□□□□ 0.36
RETP07949 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms