Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.04■□□□□ 0.48
RB1P06400 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.04■□□□□ 0.48
RB1P06400 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.04■□□□□ 0.48
RB1P06400 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.04■□□□□ 0.48
RB1P06400 SPDYE22P-201ENST00000582158 798 ntBASIC18.04■□□□□ 0.48
RB1P06400 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 AL662799.1-202ENST00000614205 422 ntBASIC18.04■□□□□ 0.48
RB1P06400 AC025048.6-201ENST00000634326 1161 ntBASIC18.04■□□□□ 0.48
RB1P06400 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RB1P06400 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RB1P06400 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RB1P06400 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.03■□□□□ 0.48
RB1P06400 GNAS-203ENST00000306120 1878 ntBASIC18.03■□□□□ 0.48
RB1P06400 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.03■□□□□ 0.48
RB1P06400 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
RB1P06400 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
RB1P06400 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 RNU1-129P-201ENST00000384064 167 ntBASIC18.03■□□□□ 0.48
RB1P06400 NME2P1-201ENST00000426182 414 ntBASIC18.03■□□□□ 0.48
RB1P06400 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.03■□□□□ 0.48
RB1P06400 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.03■□□□□ 0.48
RB1P06400 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RB1P06400 SERBP1P5-201ENST00000510079 1181 ntBASIC18.03■□□□□ 0.48
RB1P06400 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.03■□□□□ 0.48
RB1P06400 U1.21-201ENST00000580816 167 ntBASIC18.03■□□□□ 0.48
RB1P06400 MIR4453-201ENST00000584019 89 ntBASIC18.03■□□□□ 0.48
RB1P06400 AL031055.1-201ENST00000606362 631 ntBASIC18.03■□□□□ 0.48
RB1P06400 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.03■□□□□ 0.48
RB1P06400 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.03■□□□□ 0.48
RB1P06400 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RB1P06400 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.03■□□□□ 0.48
RB1P06400 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
RB1P06400 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
RB1P06400 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.03■□□□□ 0.48
RB1P06400 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RB1P06400 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RB1P06400 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
RB1P06400 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 OR8S1-201ENST00000310194 1080 ntBASIC18.02■□□□□ 0.48
RB1P06400 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.02■□□□□ 0.48
RB1P06400 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.02■□□□□ 0.48
RB1P06400 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.02■□□□□ 0.48
RB1P06400 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RB1P06400 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.02■□□□□ 0.48
RB1P06400 AL359881.2-201ENST00000602973 570 ntBASIC18.02■□□□□ 0.48
RB1P06400 AC073592.8-201ENST00000624126 511 ntBASIC18.02■□□□□ 0.48
RB1P06400 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RB1P06400 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RB1P06400 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RB1P06400 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RB1P06400 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RB1P06400 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RB1P06400 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.02■□□□□ 0.47
RB1P06400 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms