Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPNS1P04632 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPNS1P04632 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPNS1P04632 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPNS1P04632 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CAPNS1P04632 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CAPNS1P04632 NKAPP1-205ENST00000585790 367 ntBASIC17.13■□□□□ 0.33
CAPNS1P04632 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPNS1P04632 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPNS1P04632 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.13■□□□□ 0.33
CAPNS1P04632 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CAPNS1P04632 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPNS1P04632 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPNS1P04632 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.13■□□□□ 0.33
CAPNS1P04632 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.13■□□□□ 0.33
CAPNS1P04632 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CAPNS1P04632 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CAPNS1P04632 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CAPNS1P04632 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CAPNS1P04632 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 AC105020.1-201ENST00000435356 2205 ntBASIC17.12■□□□□ 0.33
CAPNS1P04632 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPNS1P04632 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CAPNS1P04632 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPNS1P04632 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPNS1P04632 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPNS1P04632 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.12■□□□□ 0.33
CAPNS1P04632 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPNS1P04632 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPNS1P04632 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPNS1P04632 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CAPNS1P04632 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.12■□□□□ 0.33
CAPNS1P04632 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
CAPNS1P04632 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CAPNS1P04632 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.12■□□□□ 0.33
CAPNS1P04632 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.11■□□□□ 0.33
CAPNS1P04632 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPNS1P04632 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 GMCL1P1-201ENST00000463439 1581 ntBASIC17.11■□□□□ 0.33
CAPNS1P04632 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CAPNS1P04632 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CAPNS1P04632 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPNS1P04632 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.11■□□□□ 0.33
CAPNS1P04632 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.11■□□□□ 0.33
CAPNS1P04632 AC113404.2-201ENST00000507884 177 ntBASIC17.11■□□□□ 0.33
CAPNS1P04632 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPNS1P04632 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPNS1P04632 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.11■□□□□ 0.33
CAPNS1P04632 C20orf181-201ENST00000623918 480 ntBASIC17.11■□□□□ 0.33
CAPNS1P04632 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPNS1P04632 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 AC125634.1-201ENST00000438758 1403 ntBASIC17.11■□□□□ 0.33
CAPNS1P04632 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CAPNS1P04632 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CAPNS1P04632 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CAPNS1P04632 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CAPNS1P04632 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPNS1P04632 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPNS1P04632 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CAPNS1P04632 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPNS1P04632 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms