Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 PGAM5P1-201ENST00000518923 814 ntBASIC15.69■□□□□ 0.1
P04436 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.69■□□□□ 0.1
P04436 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.69■□□□□ 0.1
P04436 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
P04436 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.69■□□□□ 0.1
P04436 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.69■□□□□ 0.1
P04436 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
P04436 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.69■□□□□ 0.1
P04436 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
P04436 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
P04436 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.69■□□□□ 0.1
P04436 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
P04436 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
P04436 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.68■□□□□ 0.1
P04436 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P04436 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04436 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
P04436 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
P04436 HCG4B-203ENST00000450128 991 ntBASIC15.68■□□□□ 0.1
P04436 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.68■□□□□ 0.1
P04436 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.68■□□□□ 0.1
P04436 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.68■□□□□ 0.1
P04436 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.68■□□□□ 0.1
P04436 AC002347.1-201ENST00000569543 541 ntBASIC15.68■□□□□ 0.1
P04436 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.68■□□□□ 0.1
P04436 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.68■□□□□ 0.1
P04436 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P04436 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
P04436 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.68■□□□□ 0.1
P04436 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.68■□□□□ 0.1
P04436 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
P04436 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
P04436 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
P04436 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.67■□□□□ 0.1
P04436 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.67■□□□□ 0.1
P04436 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
P04436 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
P04436 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
P04436 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
P04436 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.67■□□□□ 0.1
P04436 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.67■□□□□ 0.1
P04436 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.67■□□□□ 0.1
P04436 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.67■□□□□ 0.1
P04436 AC068880.1-201ENST00000507289 2297 ntBASIC15.67■□□□□ 0.1
P04436 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P04436 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
P04436 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
P04436 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
P04436 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.66■□□□□ 0.1
P04436 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
P04436 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
P04436 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
P04436 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
P04436 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
P04436 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms