Protein–RNA interactions for Protein: P00533

EGFR, Epidermal growth factor receptor, humanhuman

Predictions only

Length 1,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EGFRP00533 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
EGFRP00533 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EGFRP00533 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.19■□□□□ 0.82
EGFRP00533 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.19■□□□□ 0.82
EGFRP00533 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
EGFRP00533 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.19■□□□□ 0.82
EGFRP00533 AC142381.1-201ENST00000426099 345 ntBASIC20.19■□□□□ 0.82
EGFRP00533 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.19■□□□□ 0.82
EGFRP00533 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.19■□□□□ 0.82
EGFRP00533 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.19■□□□□ 0.82
EGFRP00533 LINC01451-201ENST00000623792 534 ntBASIC20.19■□□□□ 0.82
EGFRP00533 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
EGFRP00533 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.19■□□□□ 0.82
EGFRP00533 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.19■□□□□ 0.82
EGFRP00533 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EGFRP00533 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EGFRP00533 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EGFRP00533 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.18■□□□□ 0.82
EGFRP00533 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 ARSEP1-201ENST00000420443 635 ntBASIC20.18■□□□□ 0.82
EGFRP00533 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.18■□□□□ 0.82
EGFRP00533 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.18■□□□□ 0.82
EGFRP00533 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EGFRP00533 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EGFRP00533 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EGFRP00533 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.17■□□□□ 0.82
EGFRP00533 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.17■□□□□ 0.82
EGFRP00533 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.17■□□□□ 0.82
EGFRP00533 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.17■□□□□ 0.82
EGFRP00533 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.17■□□□□ 0.82
EGFRP00533 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.17■□□□□ 0.82
EGFRP00533 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.17■□□□□ 0.82
EGFRP00533 AC004233.3-201ENST00000607794 1269 ntBASIC20.17■□□□□ 0.82
EGFRP00533 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.17■□□□□ 0.82
EGFRP00533 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
EGFRP00533 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EGFRP00533 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
EGFRP00533 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.16■□□□□ 0.82
EGFRP00533 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.16■□□□□ 0.82
EGFRP00533 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.16■□□□□ 0.82
EGFRP00533 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.16■□□□□ 0.82
EGFRP00533 RARRES2P9-201ENST00000565168 469 ntBASIC20.16■□□□□ 0.82
EGFRP00533 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.16■□□□□ 0.82
EGFRP00533 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.16■□□□□ 0.82
EGFRP00533 AC018529.1-201ENST00000613063 361 ntBASIC20.16■□□□□ 0.82
EGFRP00533 MIR6752-201ENST00000618442 71 ntBASIC20.16■□□□□ 0.82
EGFRP00533 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.16■□□□□ 0.82
EGFRP00533 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.16■□□□□ 0.82
EGFRP00533 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
EGFRP00533 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
EGFRP00533 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EGFRP00533 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EGFRP00533 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EGFRP00533 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EGFRP00533 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EGFRP00533 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EGFRP00533 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EGFRP00533 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms