Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.4■□□□□ 0.06
CDRT1O95170 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDRT1O95170 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDRT1O95170 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.39■□□□□ 0.05
CDRT1O95170 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.39■□□□□ 0.05
CDRT1O95170 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.39■□□□□ 0.05
CDRT1O95170 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 TSPY14P-201ENST00000303979 915 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 SLC25A1P3-201ENST00000395415 828 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CDRT1O95170 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.39■□□□□ 0.05
CDRT1O95170 AC005104.2-201ENST00000427818 678 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 AC009947.2-201ENST00000444014 672 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.39■□□□□ 0.05
CDRT1O95170 SNORA78-201ENST00000459373 127 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CDRT1O95170 AC024909.3-201ENST00000611513 2257 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 KRT8P9-201ENST00000558927 1449 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CDRT1O95170 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDRT1O95170 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.39■□□□□ 0.05
CDRT1O95170 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDRT1O95170 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.39■□□□□ 0.05
CDRT1O95170 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDRT1O95170 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.39■□□□□ 0.05
CDRT1O95170 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 AC092850.2-201ENST00000623821 2697 ntBASIC15.39■□□□□ 0.05
CDRT1O95170 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDRT1O95170 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.38■□□□□ 0.05
CDRT1O95170 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDRT1O95170 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDRT1O95170 BX276092.7-203ENST00000637198 1536 ntBASIC15.38■□□□□ 0.05
CDRT1O95170 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CDRT1O95170 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.38■□□□□ 0.05
CDRT1O95170 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
CDRT1O95170 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.38■□□□□ 0.05
CDRT1O95170 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.38■□□□□ 0.05
CDRT1O95170 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.38■□□□□ 0.05
CDRT1O95170 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 AL139327.4-201ENST00000612362 153 ntBASIC15.38■□□□□ 0.05
CDRT1O95170 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.38■□□□□ 0.05
CDRT1O95170 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDRT1O95170 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.38■□□□□ 0.05
CDRT1O95170 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDRT1O95170 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.38■□□□□ 0.05
CDRT1O95170 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.38■□□□□ 0.05
CDRT1O95170 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.38■□□□□ 0.05
CDRT1O95170 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDRT1O95170 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDRT1O95170 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms