Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15□□□□□ -0.01
UPK1BO75841 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.99□□□□□ -0.01
UPK1BO75841 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
UPK1BO75841 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.99□□□□□ -0.01
UPK1BO75841 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UPK1BO75841 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.99□□□□□ -0.01
UPK1BO75841 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 AC004980.1-204ENST00000429707 299 ntBASIC14.99□□□□□ -0.01
UPK1BO75841 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.99□□□□□ -0.01
UPK1BO75841 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
UPK1BO75841 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.99□□□□□ -0.01
UPK1BO75841 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.99□□□□□ -0.01
UPK1BO75841 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.99□□□□□ -0.01
UPK1BO75841 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UPK1BO75841 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UPK1BO75841 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UPK1BO75841 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UPK1BO75841 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 KRT8P7-201ENST00000533003 1432 ntBASIC14.99□□□□□ -0.01
UPK1BO75841 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.99□□□□□ -0.01
UPK1BO75841 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UPK1BO75841 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1BO75841 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
UPK1BO75841 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.98□□□□□ -0.01
UPK1BO75841 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
UPK1BO75841 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UPK1BO75841 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
UPK1BO75841 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
UPK1BO75841 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 AL359258.3-201ENST00000622910 2331 ntBASIC14.98□□□□□ -0.01
UPK1BO75841 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1BO75841 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1BO75841 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
UPK1BO75841 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 AC004951.3-201ENST00000418645 1148 ntBASIC14.98□□□□□ -0.01
UPK1BO75841 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 DUSP5P2-201ENST00000426873 1033 ntBASIC14.98□□□□□ -0.01
UPK1BO75841 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1BO75841 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 AC133552.2-202ENST00000575694 574 ntBASIC14.98□□□□□ -0.01
UPK1BO75841 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.98□□□□□ -0.01
UPK1BO75841 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.98□□□□□ -0.01
UPK1BO75841 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1BO75841 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1BO75841 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.98□□□□□ -0.01
UPK1BO75841 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.98□□□□□ -0.01
UPK1BO75841 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.98□□□□□ -0.01
UPK1BO75841 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
UPK1BO75841 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UPK1BO75841 KRT8P47-201ENST00000604727 1398 ntBASIC14.98□□□□□ -0.01
UPK1BO75841 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UPK1BO75841 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms