Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TOP3BP1-201ENST00000420768 1380 ntBASIC21.4■■□□□ 1.02
CACNA1FO60840 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CACNA1FO60840 AP006288.1-201ENST00000446065 395 ntBASIC21.4■■□□□ 1.02
CACNA1FO60840 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC21.4■■□□□ 1.02
CACNA1FO60840 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.4■■□□□ 1.02
CACNA1FO60840 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CACNA1FO60840 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.4■■□□□ 1.02
CACNA1FO60840 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.4■■□□□ 1.02
CACNA1FO60840 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CACNA1FO60840 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CACNA1FO60840 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CACNA1FO60840 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.4■■□□□ 1.02
CACNA1FO60840 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.4■■□□□ 1.02
CACNA1FO60840 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CACNA1FO60840 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.39■■□□□ 1.02
CACNA1FO60840 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC21.39■■□□□ 1.02
CACNA1FO60840 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.39■■□□□ 1.02
CACNA1FO60840 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.39■■□□□ 1.02
CACNA1FO60840 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.39■■□□□ 1.02
CACNA1FO60840 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CACNA1FO60840 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
CACNA1FO60840 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CACNA1FO60840 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CACNA1FO60840 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.39■■□□□ 1.01
CACNA1FO60840 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 MIR1233-2-201ENST00000408138 82 ntBASIC21.39■■□□□ 1.01
CACNA1FO60840 MIR1233-1-201ENST00000408722 82 ntBASIC21.39■■□□□ 1.01
CACNA1FO60840 KRT18P32-201ENST00000424695 1287 ntBASIC21.39■■□□□ 1.01
CACNA1FO60840 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.39■■□□□ 1.01
CACNA1FO60840 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.39■■□□□ 1.01
CACNA1FO60840 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.39■■□□□ 1.01
CACNA1FO60840 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.39■■□□□ 1.01
CACNA1FO60840 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.39■■□□□ 1.01
CACNA1FO60840 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.39■■□□□ 1.01
CACNA1FO60840 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CACNA1FO60840 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.38■■□□□ 1.01
CACNA1FO60840 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CACNA1FO60840 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.38■■□□□ 1.01
CACNA1FO60840 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 WDR53-204ENST00000433160 887 ntTSL 5 BASIC21.38■■□□□ 1.01
CACNA1FO60840 FAM58CP-201ENST00000435741 640 ntBASIC21.38■■□□□ 1.01
CACNA1FO60840 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.38■■□□□ 1.01
CACNA1FO60840 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.38■■□□□ 1.01
CACNA1FO60840 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CACNA1FO60840 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.38■■□□□ 1.01
CACNA1FO60840 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.38■■□□□ 1.01
CACNA1FO60840 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.38■■□□□ 1.01
CACNA1FO60840 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CACNA1FO60840 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CACNA1FO60840 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CACNA1FO60840 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.37■■□□□ 1.01
CACNA1FO60840 HLA-J-202ENST00000469281 1241 ntBASIC21.37■■□□□ 1.01
CACNA1FO60840 AC005829.1-201ENST00000570002 483 ntBASIC21.37■■□□□ 1.01
CACNA1FO60840 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CACNA1FO60840 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CACNA1FO60840 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CACNA1FO60840 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CACNA1FO60840 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.37■■□□□ 1.01
CACNA1FO60840 AL645728.1-201ENST00000366221 2101 ntBASIC21.37■■□□□ 1.01
CACNA1FO60840 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CACNA1FO60840 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.37■■□□□ 1.01
CACNA1FO60840 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.37■■□□□ 1.01
CACNA1FO60840 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CACNA1FO60840 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.37■■□□□ 1.01
CACNA1FO60840 AC139530.3-201ENST00000620344 690 ntBASIC21.37■■□□□ 1.01
CACNA1FO60840 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CACNA1FO60840 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CACNA1FO60840 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CACNA1FO60840 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CACNA1FO60840 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 AL603756.1-201ENST00000606511 2163 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 GGT4P-201ENST00000623672 1708 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms