Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 MIR574-201ENST00000385209 96 ntBASIC18.62■□□□□ 0.57
EXTL3O43909 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.62■□□□□ 0.57
EXTL3O43909 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXTL3O43909 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.62■□□□□ 0.57
EXTL3O43909 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.62■□□□□ 0.57
EXTL3O43909 GGTLC5P-201ENST00000617623 998 ntBASIC18.62■□□□□ 0.57
EXTL3O43909 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.62■□□□□ 0.57
EXTL3O43909 AC139530.3-201ENST00000620344 690 ntBASIC18.62■□□□□ 0.57
EXTL3O43909 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.62■□□□□ 0.57
EXTL3O43909 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXTL3O43909 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EXTL3O43909 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXTL3O43909 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.62■□□□□ 0.57
EXTL3O43909 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXTL3O43909 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
EXTL3O43909 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.62■□□□□ 0.57
EXTL3O43909 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXTL3O43909 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.62■□□□□ 0.57
EXTL3O43909 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EXTL3O43909 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EXTL3O43909 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.62■□□□□ 0.57
EXTL3O43909 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
EXTL3O43909 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
EXTL3O43909 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.61■□□□□ 0.57
EXTL3O43909 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.61■□□□□ 0.57
EXTL3O43909 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.61■□□□□ 0.57
EXTL3O43909 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.61■□□□□ 0.57
EXTL3O43909 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.61■□□□□ 0.57
EXTL3O43909 SLC25A1P1-201ENST00000528351 927 ntBASIC18.61■□□□□ 0.57
EXTL3O43909 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.61■□□□□ 0.57
EXTL3O43909 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.61■□□□□ 0.57
EXTL3O43909 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.61■□□□□ 0.57
EXTL3O43909 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
EXTL3O43909 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.61■□□□□ 0.57
EXTL3O43909 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.61■□□□□ 0.57
EXTL3O43909 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EXTL3O43909 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.6■□□□□ 0.57
EXTL3O43909 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.6■□□□□ 0.57
EXTL3O43909 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.6■□□□□ 0.57
EXTL3O43909 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.6■□□□□ 0.57
EXTL3O43909 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.6■□□□□ 0.57
EXTL3O43909 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 PMS2P1-201ENST00000431037 1228 ntBASIC18.6■□□□□ 0.57
EXTL3O43909 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.6■□□□□ 0.57
EXTL3O43909 RNA5SP415-201ENST00000517246 115 ntBASIC18.6■□□□□ 0.57
EXTL3O43909 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.6■□□□□ 0.57
EXTL3O43909 UNC93B6-202ENST00000528242 690 ntBASIC18.6■□□□□ 0.57
EXTL3O43909 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.6■□□□□ 0.57
EXTL3O43909 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.6■□□□□ 0.57
EXTL3O43909 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.6■□□□□ 0.57
EXTL3O43909 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EXTL3O43909 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.6■□□□□ 0.57
EXTL3O43909 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.6■□□□□ 0.57
EXTL3O43909 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
EXTL3O43909 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EXTL3O43909 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
EXTL3O43909 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EXTL3O43909 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 AC106820.2-201ENST00000563775 3264 ntBASIC18.59■□□□□ 0.57
EXTL3O43909 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.59■□□□□ 0.57
EXTL3O43909 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EXTL3O43909 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
EXTL3O43909 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.59■□□□□ 0.57
EXTL3O43909 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.59■□□□□ 0.57
EXTL3O43909 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.59■□□□□ 0.57
EXTL3O43909 DUX4L17-201ENST00000557360 1267 ntBASIC18.59■□□□□ 0.57
EXTL3O43909 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.59■□□□□ 0.57
EXTL3O43909 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms