Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
MSI1O43347 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
MSI1O43347 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.83■□□□□ 0.44
MSI1O43347 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.83■□□□□ 0.44
MSI1O43347 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.83■□□□□ 0.44
MSI1O43347 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.83■□□□□ 0.44
MSI1O43347 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.83■□□□□ 0.44
MSI1O43347 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.83■□□□□ 0.44
MSI1O43347 AC027601.4-201ENST00000611259 610 ntBASIC17.83■□□□□ 0.44
MSI1O43347 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.83■□□□□ 0.44
MSI1O43347 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.83■□□□□ 0.44
MSI1O43347 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
MSI1O43347 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.83■□□□□ 0.44
MSI1O43347 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MSI1O43347 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.83■□□□□ 0.44
MSI1O43347 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.83■□□□□ 0.44
MSI1O43347 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
MSI1O43347 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSI1O43347 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.82■□□□□ 0.44
MSI1O43347 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.82■□□□□ 0.44
MSI1O43347 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.82■□□□□ 0.44
MSI1O43347 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MSI1O43347 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSI1O43347 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.82■□□□□ 0.44
MSI1O43347 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.82■□□□□ 0.44
MSI1O43347 PAWRP1-201ENST00000451083 565 ntBASIC17.82■□□□□ 0.44
MSI1O43347 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.82■□□□□ 0.44
MSI1O43347 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.82■□□□□ 0.44
MSI1O43347 OR7E47P-204ENST00000575924 449 ntBASIC17.82■□□□□ 0.44
MSI1O43347 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.82■□□□□ 0.44
MSI1O43347 AC064836.3-201ENST00000607928 673 ntBASIC17.82■□□□□ 0.44
MSI1O43347 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
MSI1O43347 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.82■□□□□ 0.44
MSI1O43347 AL645608.8-201ENST00000606034 2086 ntBASIC17.82■□□□□ 0.44
MSI1O43347 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MSI1O43347 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSI1O43347 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.82■□□□□ 0.44
MSI1O43347 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.82■□□□□ 0.44
MSI1O43347 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MSI1O43347 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MSI1O43347 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MSI1O43347 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.81■□□□□ 0.44
MSI1O43347 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.81■□□□□ 0.44
MSI1O43347 AL023806.1-201ENST00000603994 1649 ntBASIC17.81■□□□□ 0.44
MSI1O43347 MRPL20P1-201ENST00000400819 433 ntBASIC17.81■□□□□ 0.44
MSI1O43347 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.81■□□□□ 0.44
MSI1O43347 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.81■□□□□ 0.44
MSI1O43347 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MSI1O43347 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MSI1O43347 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MSI1O43347 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MSI1O43347 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MSI1O43347 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MSI1O43347 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.81■□□□□ 0.44
MSI1O43347 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.81■□□□□ 0.44
MSI1O43347 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MSI1O43347 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.8■□□□□ 0.44
MSI1O43347 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 AC108860.2-201ENST00000562760 2183 ntBASIC17.8■□□□□ 0.44
MSI1O43347 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MSI1O43347 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.8■□□□□ 0.44
MSI1O43347 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.8■□□□□ 0.44
MSI1O43347 VN2R19P-201ENST00000442399 1052 ntBASIC17.8■□□□□ 0.44
MSI1O43347 KRT18P3-201ENST00000451602 1288 ntBASIC17.8■□□□□ 0.44
MSI1O43347 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
MSI1O43347 AC087163.2-201ENST00000457299 853 ntBASIC17.8■□□□□ 0.44
MSI1O43347 SLC25A6P2-201ENST00000497974 877 ntBASIC17.8■□□□□ 0.44
MSI1O43347 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.8■□□□□ 0.44
MSI1O43347 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.8■□□□□ 0.44
MSI1O43347 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.8■□□□□ 0.44
MSI1O43347 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.8■□□□□ 0.44
MSI1O43347 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.8■□□□□ 0.44
MSI1O43347 GGTLC5P-201ENST00000617623 998 ntBASIC17.8■□□□□ 0.44
MSI1O43347 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.8■□□□□ 0.44
MSI1O43347 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.8■□□□□ 0.44
MSI1O43347 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MSI1O43347 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms