Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.58■□□□□ 0.88
SEMA3EO15041 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA3EO15041 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA3EO15041 FRMD8P1-201ENST00000440433 1524 ntBASIC20.58■□□□□ 0.88
SEMA3EO15041 AC012569.1-201ENST00000591191 1524 ntBASIC20.58■□□□□ 0.88
SEMA3EO15041 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA3EO15041 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SEMA3EO15041 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA3EO15041 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA3EO15041 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA3EO15041 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA3EO15041 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.57■□□□□ 0.88
SEMA3EO15041 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA3EO15041 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.57■□□□□ 0.88
SEMA3EO15041 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.57■□□□□ 0.88
SEMA3EO15041 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA3EO15041 FAM86C2P-203ENST00000528684 1004 ntBASIC20.57■□□□□ 0.88
SEMA3EO15041 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.57■□□□□ 0.88
SEMA3EO15041 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SEMA3EO15041 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA3EO15041 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA3EO15041 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA3EO15041 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA3EO15041 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SEMA3EO15041 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA3EO15041 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.57■□□□□ 0.88
SEMA3EO15041 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA3EO15041 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA3EO15041 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SEMA3EO15041 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA3EO15041 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.56■□□□□ 0.88
SEMA3EO15041 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA3EO15041 AL355306.1-201ENST00000415580 579 ntBASIC20.56■□□□□ 0.88
SEMA3EO15041 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA3EO15041 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.56■□□□□ 0.88
SEMA3EO15041 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SEMA3EO15041 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SEMA3EO15041 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.56■□□□□ 0.88
SEMA3EO15041 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.56■□□□□ 0.88
SEMA3EO15041 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SEMA3EO15041 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.55■□□□□ 0.88
SEMA3EO15041 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.55■□□□□ 0.88
SEMA3EO15041 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.55■□□□□ 0.88
SEMA3EO15041 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
SEMA3EO15041 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SEMA3EO15041 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.55■□□□□ 0.88
SEMA3EO15041 AC022145.2-201ENST00000598203 171 ntBASIC20.55■□□□□ 0.88
SEMA3EO15041 AC004835.2-201ENST00000603762 682 ntBASIC20.55■□□□□ 0.88
SEMA3EO15041 AC027612.4-201ENST00000605371 583 ntBASIC20.55■□□□□ 0.88
SEMA3EO15041 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
SEMA3EO15041 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SEMA3EO15041 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 AL021920.2-201ENST00000624828 1351 ntBASIC20.55■□□□□ 0.88
SEMA3EO15041 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SEMA3EO15041 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SEMA3EO15041 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.54■□□□□ 0.88
SEMA3EO15041 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.54■□□□□ 0.88
SEMA3EO15041 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SEMA3EO15041 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.54■□□□□ 0.88
SEMA3EO15041 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 AC004461.1-201ENST00000412461 403 ntBASIC20.54■□□□□ 0.88
SEMA3EO15041 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.54■□□□□ 0.88
SEMA3EO15041 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.54■□□□□ 0.88
SEMA3EO15041 AC109635.5-201ENST00000533593 962 ntBASIC20.54■□□□□ 0.88
SEMA3EO15041 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.54■□□□□ 0.88
SEMA3EO15041 AC124947.2-201ENST00000547118 1133 ntBASIC20.54■□□□□ 0.88
SEMA3EO15041 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SEMA3EO15041 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SEMA3EO15041 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.54■□□□□ 0.88
SEMA3EO15041 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.54■□□□□ 0.88
SEMA3EO15041 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms