Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN9O14815 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN9O14815 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN9O14815 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN9O14815 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN9O14815 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN9O14815 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CAPN9O14815 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN9O14815 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CAPN9O14815 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.19■□□□□ 0.5
CAPN9O14815 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.19■□□□□ 0.5
CAPN9O14815 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CAPN9O14815 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CAPN9O14815 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
CAPN9O14815 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CAPN9O14815 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN9O14815 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.18■□□□□ 0.5
CAPN9O14815 FDX1P1-201ENST00000449115 551 ntBASIC18.18■□□□□ 0.5
CAPN9O14815 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.18■□□□□ 0.5
CAPN9O14815 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 AC021087.4-201ENST00000563761 564 ntBASIC18.18■□□□□ 0.5
CAPN9O14815 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.18■□□□□ 0.5
CAPN9O14815 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.18■□□□□ 0.5
CAPN9O14815 AC064862.7-201ENST00000604520 867 ntBASIC18.18■□□□□ 0.5
CAPN9O14815 TP73-AS1-207ENST00000624167 988 ntBASIC18.18■□□□□ 0.5
CAPN9O14815 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.18■□□□□ 0.5
CAPN9O14815 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN9O14815 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN9O14815 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 AC097637.2-201ENST00000624096 1997 ntBASIC18.17■□□□□ 0.5
CAPN9O14815 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 AC016396.2-201ENST00000562575 1417 ntBASIC18.17■□□□□ 0.5
CAPN9O14815 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.17■□□□□ 0.5
CAPN9O14815 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.17■□□□□ 0.5
CAPN9O14815 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.17■□□□□ 0.5
CAPN9O14815 RNPS1P1-201ENST00000507437 918 ntBASIC18.17■□□□□ 0.5
CAPN9O14815 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CAPN9O14815 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.17■□□□□ 0.5
CAPN9O14815 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.17■□□□□ 0.5
CAPN9O14815 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 AL135999.2-201ENST00000622438 1686 ntBASIC18.17■□□□□ 0.5
CAPN9O14815 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN9O14815 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
CAPN9O14815 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN9O14815 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN9O14815 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN9O14815 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CAPN9O14815 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN9O14815 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CAPN9O14815 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN9O14815 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CAPN9O14815 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN9O14815 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN9O14815 AL139384.1-201ENST00000612143 3047 ntBASIC18.16■□□□□ 0.5
CAPN9O14815 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms