Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.69■□□□□ 0.26
UBFD1O14562 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBFD1O14562 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.68■□□□□ 0.26
UBFD1O14562 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
UBFD1O14562 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.68■□□□□ 0.26
UBFD1O14562 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
UBFD1O14562 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.68■□□□□ 0.26
UBFD1O14562 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.68■□□□□ 0.26
UBFD1O14562 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.68■□□□□ 0.26
UBFD1O14562 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.68■□□□□ 0.26
UBFD1O14562 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.68■□□□□ 0.26
UBFD1O14562 TPSP2-201ENST00000561760 610 ntBASIC16.68■□□□□ 0.26
UBFD1O14562 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.68■□□□□ 0.26
UBFD1O14562 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 AC116407.4-201ENST00000623319 1061 ntBASIC16.68■□□□□ 0.26
UBFD1O14562 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.68■□□□□ 0.26
UBFD1O14562 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.68■□□□□ 0.26
UBFD1O14562 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
UBFD1O14562 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.68■□□□□ 0.26
UBFD1O14562 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBFD1O14562 KRT18P1-202ENST00000452408 1331 ntBASIC16.68■□□□□ 0.26
UBFD1O14562 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.67■□□□□ 0.26
UBFD1O14562 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
UBFD1O14562 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.67■□□□□ 0.26
UBFD1O14562 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBFD1O14562 LINC02199-201ENST00000506655 2702 ntBASIC16.67■□□□□ 0.26
UBFD1O14562 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 RCN1P2-201ENST00000398357 915 ntBASIC16.67■□□□□ 0.26
UBFD1O14562 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.67■□□□□ 0.26
UBFD1O14562 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.67■□□□□ 0.26
UBFD1O14562 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
UBFD1O14562 DRAXINP1-201ENST00000437611 948 ntBASIC16.67■□□□□ 0.26
UBFD1O14562 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 NUS1P1-201ENST00000446295 882 ntBASIC16.67■□□□□ 0.26
UBFD1O14562 TSSC2-201ENST00000450217 709 ntBASIC16.67■□□□□ 0.26
UBFD1O14562 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.67■□□□□ 0.26
UBFD1O14562 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.67■□□□□ 0.26
UBFD1O14562 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBFD1O14562 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
UBFD1O14562 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 HLA-A-202ENST00000376806 1854 ntBASIC16.67■□□□□ 0.26
UBFD1O14562 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.67■□□□□ 0.26
UBFD1O14562 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UBFD1O14562 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.67■□□□□ 0.26
UBFD1O14562 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBFD1O14562 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBFD1O14562 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.66■□□□□ 0.26
UBFD1O14562 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBFD1O14562 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.66■□□□□ 0.26
UBFD1O14562 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.66■□□□□ 0.26
UBFD1O14562 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.66■□□□□ 0.26
UBFD1O14562 DUX4L17-201ENST00000557360 1267 ntBASIC16.66■□□□□ 0.26
UBFD1O14562 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.66■□□□□ 0.26
UBFD1O14562 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.66■□□□□ 0.26
UBFD1O14562 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms