Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC28.99■■■□□ 2.23
CUX2O14529 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
CUX2O14529 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CUX2O14529 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
CUX2O14529 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CUX2O14529 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC28.99■■■□□ 2.23
CUX2O14529 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CUX2O14529 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CUX2O14529 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
CUX2O14529 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
CUX2O14529 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC28.98■■■□□ 2.23
CUX2O14529 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC28.98■■■□□ 2.23
CUX2O14529 MPRIPP1-201ENST00000452433 1089 ntBASIC28.98■■■□□ 2.23
CUX2O14529 IGHJ2P-201ENST00000454480 60 ntBASIC28.98■■■□□ 2.23
CUX2O14529 LDHBP1-201ENST00000455730 1119 ntBASIC28.98■■■□□ 2.23
CUX2O14529 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CUX2O14529 RPS15-212ENST00000593052 629 ntTSL 2 BASIC28.98■■■□□ 2.23
CUX2O14529 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC28.98■■■□□ 2.23
CUX2O14529 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC28.98■■■□□ 2.23
CUX2O14529 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CUX2O14529 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CUX2O14529 AP3S2-216ENST00000617003 1561 ntBASIC28.98■■■□□ 2.23
CUX2O14529 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC28.98■■■□□ 2.23
CUX2O14529 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CUX2O14529 MBP-227ENST00000526111 581 ntTSL 4 BASIC28.97■■■□□ 2.23
CUX2O14529 AL021578.1-201ENST00000613646 709 ntBASIC28.97■■■□□ 2.23
CUX2O14529 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CUX2O14529 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CUX2O14529 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC28.97■■■□□ 2.23
CUX2O14529 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC28.97■■■□□ 2.23
CUX2O14529 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
CUX2O14529 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC28.97■■■□□ 2.23
CUX2O14529 BTBD6P1-201ENST00000412176 1267 ntBASIC28.97■■■□□ 2.23
CUX2O14529 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC28.97■■■□□ 2.23
CUX2O14529 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC28.97■■■□□ 2.23
CUX2O14529 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CUX2O14529 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC28.97■■■□□ 2.23
CUX2O14529 AC079328.1-201ENST00000560358 952 ntBASIC28.97■■■□□ 2.23
CUX2O14529 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC28.97■■■□□ 2.23
CUX2O14529 MIR4722-201ENST00000578292 60 ntBASIC28.97■■■□□ 2.23
CUX2O14529 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
CUX2O14529 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
CUX2O14529 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC28.96■■■□□ 2.23
CUX2O14529 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC28.96■■■□□ 2.23
CUX2O14529 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC28.96■■■□□ 2.23
CUX2O14529 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
CUX2O14529 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CUX2O14529 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CUX2O14529 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CUX2O14529 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CUX2O14529 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CUX2O14529 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC28.96■■■□□ 2.23
CUX2O14529 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC28.96■■■□□ 2.23
CUX2O14529 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC28.96■■■□□ 2.23
CUX2O14529 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC28.96■■■□□ 2.23
CUX2O14529 DERL2-202ENST00000570848 657 ntTSL 5 BASIC28.96■■■□□ 2.23
CUX2O14529 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC28.96■■■□□ 2.23
CUX2O14529 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC28.96■■■□□ 2.23
CUX2O14529 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC28.96■■■□□ 2.23
CUX2O14529 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
CUX2O14529 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC28.96■■■□□ 2.23
CUX2O14529 POR-209ENST00000439269 1858 ntTSL 2 BASIC28.95■■■□□ 2.23
CUX2O14529 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CUX2O14529 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
CUX2O14529 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
CUX2O14529 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC28.95■■■□□ 2.23
CUX2O14529 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CUX2O14529 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
CUX2O14529 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
CUX2O14529 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC28.95■■■□□ 2.23
CUX2O14529 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC28.95■■■□□ 2.23
CUX2O14529 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC28.95■■■□□ 2.23
CUX2O14529 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CUX2O14529 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CUX2O14529 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC28.95■■■□□ 2.22
CUX2O14529 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CUX2O14529 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
CUX2O14529 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC28.95■■■□□ 2.22
CUX2O14529 KRT43P-201ENST00000434019 910 ntBASIC28.95■■■□□ 2.22
CUX2O14529 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC28.95■■■□□ 2.22
CUX2O14529 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC28.95■■■□□ 2.22
CUX2O14529 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC28.95■■■□□ 2.22
CUX2O14529 MIR3909-201ENST00000579518 119 ntBASIC28.95■■■□□ 2.22
CUX2O14529 AC005412.3-201ENST00000580309 715 ntBASIC28.95■■■□□ 2.22
CUX2O14529 AC016629.1-201ENST00000596579 586 ntBASIC28.95■■■□□ 2.22
CUX2O14529 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC28.95■■■□□ 2.22
CUX2O14529 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
CUX2O14529 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
CUX2O14529 AC093525.8-201ENST00000624099 1342 ntBASIC28.95■■■□□ 2.22
CUX2O14529 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CUX2O14529 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CUX2O14529 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
CUX2O14529 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC28.94■■■□□ 2.22
CUX2O14529 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CUX2O14529 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
CUX2O14529 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC28.94■■■□□ 2.22
CUX2O14529 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC28.94■■■□□ 2.22
CUX2O14529 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC28.94■■■□□ 2.22
CUX2O14529 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC28.94■■■□□ 2.22
CUX2O14529 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms