Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM38O00635 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM38O00635 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM38O00635 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM38O00635 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM38O00635 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM38O00635 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM38O00635 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.34■□□□□ 0.37
TRIM38O00635 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM38O00635 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 AL691403.2-201ENST00000618460 490 ntBASIC17.34■□□□□ 0.37
TRIM38O00635 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM38O00635 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM38O00635 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRIM38O00635 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRIM38O00635 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM38O00635 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM38O00635 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM38O00635 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM38O00635 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRIM38O00635 AC093010.1-201ENST00000473625 1624 ntBASIC17.33■□□□□ 0.37
TRIM38O00635 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM38O00635 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.33■□□□□ 0.36
TRIM38O00635 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM38O00635 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM38O00635 AC010327.4-202ENST00000591484 748 ntBASIC17.33■□□□□ 0.36
TRIM38O00635 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM38O00635 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TRIM38O00635 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM38O00635 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM38O00635 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM38O00635 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM38O00635 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM38O00635 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 AC079776.2-201ENST00000641154 1609 ntBASIC17.32■□□□□ 0.36
TRIM38O00635 AL138688.1-201ENST00000624851 1594 ntBASIC17.32■□□□□ 0.36
TRIM38O00635 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM38O00635 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM38O00635 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
TRIM38O00635 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 UPF3AP3-201ENST00000420996 769 ntBASIC17.32■□□□□ 0.36
TRIM38O00635 LAGE3P1-201ENST00000425356 484 ntBASIC17.32■□□□□ 0.36
TRIM38O00635 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
TRIM38O00635 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM38O00635 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.32■□□□□ 0.36
TRIM38O00635 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TRIM38O00635 AL139424.1-201ENST00000607572 797 ntBASIC17.32■□□□□ 0.36
TRIM38O00635 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM38O00635 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.32■□□□□ 0.36
TRIM38O00635 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRIM38O00635 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRIM38O00635 PMPCAP1-201ENST00000508114 1576 ntBASIC17.32■□□□□ 0.36
TRIM38O00635 AC010460.3-201ENST00000511359 1579 ntBASIC17.32■□□□□ 0.36
TRIM38O00635 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
TRIM38O00635 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.31■□□□□ 0.36
TRIM38O00635 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM38O00635 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM38O00635 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRIM38O00635 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM38O00635 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM38O00635 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms