Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC28A1O00337 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A1O00337 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A1O00337 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC28A1O00337 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC28A1O00337 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC28A1O00337 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A1O00337 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A1O00337 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC28A1O00337 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SLC28A1O00337 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC28A1O00337 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC28A1O00337 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC28A1O00337 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SLC28A1O00337 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.57■□□□□ 0.24
SLC28A1O00337 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC28A1O00337 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SLC28A1O00337 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SLC28A1O00337 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC28A1O00337 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
SLC28A1O00337 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SLC28A1O00337 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 DRAXINP1-201ENST00000437611 948 ntBASIC16.56■□□□□ 0.24
SLC28A1O00337 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.56■□□□□ 0.24
SLC28A1O00337 AL049597.2-201ENST00000565575 961 ntBASIC16.56■□□□□ 0.24
SLC28A1O00337 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.56■□□□□ 0.24
SLC28A1O00337 AC116407.4-201ENST00000623319 1061 ntBASIC16.56■□□□□ 0.24
SLC28A1O00337 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 AC078925.2-201ENST00000624013 1973 ntBASIC16.56■□□□□ 0.24
SLC28A1O00337 INTS4P1-201ENST00000438455 1935 ntBASIC16.56■□□□□ 0.24
SLC28A1O00337 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC28A1O00337 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SLC28A1O00337 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC28A1O00337 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
SLC28A1O00337 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SLC28A1O00337 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A1O00337 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SLC28A1O00337 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SLC28A1O00337 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SLC28A1O00337 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC28A1O00337 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A1O00337 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A1O00337 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A1O00337 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A1O00337 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A1O00337 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC28A1O00337 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.55■□□□□ 0.24
SLC28A1O00337 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC28A1O00337 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A1O00337 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.55■□□□□ 0.24
SLC28A1O00337 KRT17P6-201ENST00000453795 1220 ntBASIC16.55■□□□□ 0.24
SLC28A1O00337 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms