Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PAWRP1-201ENST00000451083 565 ntBASIC15.19■□□□□ 0.02
NPIPB4C9JG80 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 MTDHP4-201ENST00000600287 670 ntBASIC15.19■□□□□ 0.02
NPIPB4C9JG80 AC064862.7-201ENST00000604520 867 ntBASIC15.19■□□□□ 0.02
NPIPB4C9JG80 AC013467.2-201ENST00000605472 835 ntBASIC15.19■□□□□ 0.02
NPIPB4C9JG80 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 AL139011.1-202ENST00000642063 584 ntBASIC15.19■□□□□ 0.02
NPIPB4C9JG80 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NPIPB4C9JG80 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 AKR1C7P-201ENST00000305623 895 ntBASIC15.18■□□□□ 0.02
NPIPB4C9JG80 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 HLA-J-202ENST00000469281 1241 ntBASIC15.18■□□□□ 0.02
NPIPB4C9JG80 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 PCDHB17P-201ENST00000539533 2393 ntBASIC15.18■□□□□ 0.02
NPIPB4C9JG80 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NPIPB4C9JG80 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.17■□□□□ 0.02
NPIPB4C9JG80 AC006557.2-201ENST00000592985 1240 ntBASIC15.17■□□□□ 0.02
NPIPB4C9JG80 AC025062.2-201ENST00000605477 670 ntBASIC15.17■□□□□ 0.02
NPIPB4C9JG80 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms