Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
TBC1D3FA6NER0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 AC091812.2-201ENST00000619081 385 ntBASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TBC1D3FA6NER0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.08■□□□□ 0.33
TBC1D3FA6NER0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TBC1D3FA6NER0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.08■□□□□ 0.33
TBC1D3FA6NER0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TBC1D3FA6NER0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TBC1D3FA6NER0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 METTL21AP1-201ENST00000438852 635 ntBASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 ACTG1P14-201ENST00000446382 1122 ntBASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 AC027796.2-201ENST00000575326 344 ntBASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 AC068137.2-201ENST00000605408 478 ntBASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TBC1D3FA6NER0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 ACTL9-202ENST00000612068 1252 ntBASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TBC1D3FA6NER0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TBC1D3FA6NER0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms